Hb_100404_010

Information

Type -
Description -
Location Contig100404: 5900-8319
Sequence    

Annotation

kegg
ID gmx:100788472
description cysteine-rich receptor-like protein kinase 26-like
nr
ID KHN01554.1
description Cysteine-rich receptor-like protein kinase 29 [Glycine soja]
swissprot
ID Q8S9L6
description Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1
trembl
ID A0A0B2P232
description Cysteine-rich receptor-like protein kinase 29 OS=Glycine soja GN=glysoja_037908 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich receptor-like protein kinase 25

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100404_010 0.0 - - Cysteine-rich receptor-like protein kinase 29 [Glycine soja]
2 Hb_001205_050 0.0372986137 - - -
3 Hb_147069_010 0.0551090817 - - Phosphate import ATP-binding PstB 2 [Gossypium arboreum]
4 Hb_000832_360 0.0885041452 - - -
5 Hb_073467_010 0.1154585636 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]
6 Hb_000103_380 0.1172056186 - - PREDICTED: uncharacterized protein LOC104596624 [Nelumbo nucifera]
7 Hb_003058_160 0.1208511329 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004924_040 0.1210774838 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
9 Hb_001105_140 0.1249748283 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
10 Hb_005736_080 0.1277112404 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
11 Hb_141990_030 0.1292911462 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
12 Hb_002977_020 0.1334109344 - - PREDICTED: glycine-rich cell wall structural protein 1.8-like [Nelumbo nucifera]
13 Hb_001242_030 0.1450932532 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001546_170 0.1495179929 - - ankyrin repeat-containing protein, putative [Ricinus communis]
15 Hb_001021_020 0.1540769778 - - hypothetical protein JCGZ_13899 [Jatropha curcas]
16 Hb_000227_180 0.1571260835 - - PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Jatropha curcas]
17 Hb_000189_460 0.1613234002 - - -
18 Hb_000334_010 0.163933761 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
19 Hb_002876_010 0.1681609494 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
20 Hb_145331_010 0.1703951308 transcription factor TF Family: NAC hypothetical protein POPTR_0016s07690g [Populus trichocarpa]

Gene co-expression network

sample Hb_100404_010 Hb_100404_010 Hb_001205_050 Hb_001205_050 Hb_100404_010--Hb_001205_050 Hb_147069_010 Hb_147069_010 Hb_100404_010--Hb_147069_010 Hb_000832_360 Hb_000832_360 Hb_100404_010--Hb_000832_360 Hb_073467_010 Hb_073467_010 Hb_100404_010--Hb_073467_010 Hb_000103_380 Hb_000103_380 Hb_100404_010--Hb_000103_380 Hb_003058_160 Hb_003058_160 Hb_100404_010--Hb_003058_160 Hb_001205_050--Hb_147069_010 Hb_001205_050--Hb_000832_360 Hb_001205_050--Hb_000103_380 Hb_001105_140 Hb_001105_140 Hb_001205_050--Hb_001105_140 Hb_001205_050--Hb_073467_010 Hb_147069_010--Hb_000832_360 Hb_147069_010--Hb_000103_380 Hb_147069_010--Hb_001105_140 Hb_005736_080 Hb_005736_080 Hb_147069_010--Hb_005736_080 Hb_000832_360--Hb_000103_380 Hb_000832_360--Hb_001105_140 Hb_000832_360--Hb_005736_080 Hb_141990_030 Hb_141990_030 Hb_000832_360--Hb_141990_030 Hb_073467_010--Hb_003058_160 Hb_004924_040 Hb_004924_040 Hb_073467_010--Hb_004924_040 Hb_073467_010--Hb_141990_030 Hb_073467_010--Hb_005736_080 Hb_073467_010--Hb_001105_140 Hb_073467_010--Hb_000103_380 Hb_000103_380--Hb_001105_140 Hb_000103_380--Hb_005736_080 Hb_000103_380--Hb_141990_030 Hb_002876_010 Hb_002876_010 Hb_000103_380--Hb_002876_010 Hb_000103_380--Hb_003058_160 Hb_003058_160--Hb_004924_040 Hb_003058_160--Hb_141990_030 Hb_003058_160--Hb_005736_080 Hb_003058_160--Hb_001105_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0277326 0.049812 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.118908

CAGE analysis