Hb_100790_010

Information

Type -
Description -
Location Contig100790: 7513-8530
Sequence    

Annotation

kegg
ID rcu:RCOM_1429750
description hypothetical protein
nr
ID XP_002512308.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9REY9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1429750 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100790_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_010080_010 0.1053969769 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
3 Hb_146255_020 0.1082473333 - - PREDICTED: chromatin structure-remodeling complex protein BSH [Jatropha curcas]
4 Hb_006061_040 0.11243367 - - PREDICTED: protein PHYLLO, chloroplastic [Jatropha curcas]
5 Hb_000120_250 0.1180631445 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
6 Hb_001950_070 0.1240959337 - - cyclin d, putative [Ricinus communis]
7 Hb_001500_120 0.1289641448 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_004712_190 0.129938033 - - PREDICTED: uncharacterized protein LOC105633105 [Jatropha curcas]
9 Hb_007741_130 0.1312670178 - - hypothetical protein B456_007G089000 [Gossypium raimondii]
10 Hb_001077_070 0.1338082046 - - 60S ribosomal protein L9, putative [Ricinus communis]
11 Hb_002311_480 0.1339449009 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]
12 Hb_009486_210 0.1378699422 - - -
13 Hb_001804_090 0.1406891047 - - PREDICTED: uracil phosphoribosyltransferase isoform X1 [Jatropha curcas]
14 Hb_000979_060 0.141379083 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
15 Hb_011053_010 0.1424809069 - - PREDICTED: uncharacterized protein LOC105631146 [Jatropha curcas]
16 Hb_029388_010 0.1451080736 transcription factor TF Family: C2C2-CO-like PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
17 Hb_011671_310 0.1456907881 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]
18 Hb_000905_120 0.1461984094 - - PREDICTED: uncharacterized protein LOC105628677 [Jatropha curcas]
19 Hb_001191_080 0.146361388 - - protein with unknown function [Ricinus communis]
20 Hb_004807_020 0.1489039879 - - PREDICTED: transcription initiation factor TFIID subunit 14b-like [Jatropha curcas]

Gene co-expression network

sample Hb_100790_010 Hb_100790_010 Hb_010080_010 Hb_010080_010 Hb_100790_010--Hb_010080_010 Hb_146255_020 Hb_146255_020 Hb_100790_010--Hb_146255_020 Hb_006061_040 Hb_006061_040 Hb_100790_010--Hb_006061_040 Hb_000120_250 Hb_000120_250 Hb_100790_010--Hb_000120_250 Hb_001950_070 Hb_001950_070 Hb_100790_010--Hb_001950_070 Hb_001500_120 Hb_001500_120 Hb_100790_010--Hb_001500_120 Hb_010080_010--Hb_000120_250 Hb_000975_240 Hb_000975_240 Hb_010080_010--Hb_000975_240 Hb_011386_050 Hb_011386_050 Hb_010080_010--Hb_011386_050 Hb_001277_280 Hb_001277_280 Hb_010080_010--Hb_001277_280 Hb_000340_130 Hb_000340_130 Hb_010080_010--Hb_000340_130 Hb_146255_020--Hb_006061_040 Hb_004807_020 Hb_004807_020 Hb_146255_020--Hb_004807_020 Hb_002343_040 Hb_002343_040 Hb_146255_020--Hb_002343_040 Hb_001025_090 Hb_001025_090 Hb_146255_020--Hb_001025_090 Hb_001105_170 Hb_001105_170 Hb_146255_020--Hb_001105_170 Hb_001804_090 Hb_001804_090 Hb_146255_020--Hb_001804_090 Hb_006061_040--Hb_004807_020 Hb_006061_040--Hb_001804_090 Hb_000926_200 Hb_000926_200 Hb_006061_040--Hb_000926_200 Hb_011053_010 Hb_011053_010 Hb_006061_040--Hb_011053_010 Hb_006061_040--Hb_002343_040 Hb_011671_310 Hb_011671_310 Hb_000120_250--Hb_011671_310 Hb_029388_010 Hb_029388_010 Hb_000120_250--Hb_029388_010 Hb_002311_480 Hb_002311_480 Hb_000120_250--Hb_002311_480 Hb_000979_060 Hb_000979_060 Hb_000120_250--Hb_000979_060 Hb_001077_070 Hb_001077_070 Hb_001950_070--Hb_001077_070 Hb_001191_080 Hb_001191_080 Hb_001950_070--Hb_001191_080 Hb_004096_160 Hb_004096_160 Hb_001950_070--Hb_004096_160 Hb_004712_190 Hb_004712_190 Hb_001950_070--Hb_004712_190 Hb_003449_100 Hb_003449_100 Hb_001950_070--Hb_003449_100 Hb_005977_030 Hb_005977_030 Hb_001500_120--Hb_005977_030 Hb_000723_030 Hb_000723_030 Hb_001500_120--Hb_000723_030 Hb_001500_120--Hb_004712_190 Hb_001500_120--Hb_002311_480 Hb_001500_120--Hb_011671_310 Hb_003470_040 Hb_003470_040 Hb_001500_120--Hb_003470_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.03139 1.73276 6.34481 1.79632 0.634636 1.1234
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.02593 2.41941 1.43238 1.53402 0.925763

CAGE analysis