Hb_100964_010

Information

Type -
Description -
Location Contig100964: 2405-2934
Sequence    

Annotation

kegg
ID rcu:RCOM_1494410
description serine-threonine protein kinase, plant-type, putative (EC:2.7.10.2)
nr
ID XP_002516047.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RQM8
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494410 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100964_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_002929_130 0.1612673333 - - phosphofructokinase [Hevea brasiliensis]
3 Hb_002035_090 0.2189627966 - - -
4 Hb_007603_020 0.2209281759 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
5 Hb_114984_010 0.2238657342 - - conserved hypothetical protein [Ricinus communis]
6 Hb_138600_010 0.2262435007 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
7 Hb_050686_010 0.2265075452 - - conserved hypothetical protein [Ricinus communis]
8 Hb_029510_010 0.2271583568 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
9 Hb_001916_060 0.227272474 - - PREDICTED: putative protein FAR1-RELATED SEQUENCE 10 isoform X2 [Jatropha curcas]
10 Hb_010315_070 0.2300451172 - - -
11 Hb_006831_100 0.2321501312 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
12 Hb_007333_030 0.2357762883 - - -
13 Hb_000256_210 0.2375855256 - - PREDICTED: 40S ribosomal protein S11-like [Phoenix dactylifera]
14 Hb_001450_100 0.244690664 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
15 Hb_000832_200 0.245510432 - - 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
16 Hb_007137_060 0.2465604522 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
17 Hb_077211_010 0.2466366256 - - PREDICTED: lariat debranching enzyme-like [Jatropha curcas]
18 Hb_000021_020 0.2479073577 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Malus domestica]
19 Hb_005803_010 0.2483638393 - - PREDICTED: probable zinc metallopeptidase EGY3, chloroplastic isoform X1 [Jatropha curcas]
20 Hb_000735_010 0.2506832433 - - -

Gene co-expression network

sample Hb_100964_010 Hb_100964_010 Hb_002929_130 Hb_002929_130 Hb_100964_010--Hb_002929_130 Hb_002035_090 Hb_002035_090 Hb_100964_010--Hb_002035_090 Hb_007603_020 Hb_007603_020 Hb_100964_010--Hb_007603_020 Hb_114984_010 Hb_114984_010 Hb_100964_010--Hb_114984_010 Hb_138600_010 Hb_138600_010 Hb_100964_010--Hb_138600_010 Hb_050686_010 Hb_050686_010 Hb_100964_010--Hb_050686_010 Hb_029921_020 Hb_029921_020 Hb_002929_130--Hb_029921_020 Hb_000256_210 Hb_000256_210 Hb_002929_130--Hb_000256_210 Hb_089140_060 Hb_089140_060 Hb_002929_130--Hb_089140_060 Hb_002929_130--Hb_007603_020 Hb_026206_020 Hb_026206_020 Hb_002929_130--Hb_026206_020 Hb_006615_100 Hb_006615_100 Hb_002035_090--Hb_006615_100 Hb_002035_080 Hb_002035_080 Hb_002035_090--Hb_002035_080 Hb_002035_090--Hb_007603_020 Hb_002035_090--Hb_026206_020 Hb_007680_020 Hb_007680_020 Hb_002035_090--Hb_007680_020 Hb_000997_410 Hb_000997_410 Hb_002035_090--Hb_000997_410 Hb_001767_040 Hb_001767_040 Hb_007603_020--Hb_001767_040 Hb_000181_410 Hb_000181_410 Hb_007603_020--Hb_000181_410 Hb_001622_010 Hb_001622_010 Hb_007603_020--Hb_001622_010 Hb_000165_140 Hb_000165_140 Hb_007603_020--Hb_000165_140 Hb_004920_060 Hb_004920_060 Hb_114984_010--Hb_004920_060 Hb_001731_020 Hb_001731_020 Hb_114984_010--Hb_001731_020 Hb_114984_010--Hb_000997_410 Hb_001489_070 Hb_001489_070 Hb_114984_010--Hb_001489_070 Hb_000116_460 Hb_000116_460 Hb_114984_010--Hb_000116_460 Hb_000021_020 Hb_000021_020 Hb_114984_010--Hb_000021_020 Hb_029510_010 Hb_029510_010 Hb_138600_010--Hb_029510_010 Hb_000163_280 Hb_000163_280 Hb_138600_010--Hb_000163_280 Hb_002232_290 Hb_002232_290 Hb_138600_010--Hb_002232_290 Hb_088542_010 Hb_088542_010 Hb_138600_010--Hb_088542_010 Hb_004102_130 Hb_004102_130 Hb_138600_010--Hb_004102_130 Hb_000250_080 Hb_000250_080 Hb_138600_010--Hb_000250_080 Hb_050686_010--Hb_114984_010 Hb_006483_010 Hb_006483_010 Hb_050686_010--Hb_006483_010 Hb_000366_190 Hb_000366_190 Hb_050686_010--Hb_000366_190 Hb_000040_050 Hb_000040_050 Hb_050686_010--Hb_000040_050 Hb_120662_010 Hb_120662_010 Hb_050686_010--Hb_120662_010 Hb_000329_420 Hb_000329_420 Hb_050686_010--Hb_000329_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.5616 0.880033 1.40418 0.821737 3.09144 2.41466
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.28695 0.661362 0

CAGE analysis