Hb_101462_010

Information

Type -
Description -
Location Contig101462: 1005-6221
Sequence    

Annotation

kegg
ID pop:POPTR_0007s00830g
description POPTRDRAFT_763717; hypothetical protein
nr
ID XP_012066213.1
description PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6J4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23780 PE=4 SV=1
Gene Ontology
ID GO:0005488
description l-type lectin-domain containing receptor kinase -like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101462_010 0.0 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
2 Hb_000373_140 0.0683634928 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
3 Hb_000123_070 0.0770424368 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
4 Hb_004208_040 0.0957154775 - - UDP-glycosyltransferase 86A1 [Morus notabilis]
5 Hb_079902_010 0.0990598353 - - cytochrome c biogenesis B (mitochondrion) [Hevea brasiliensis]
6 Hb_004987_040 0.1020237706 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
7 Hb_004375_020 0.1021988461 - - hypothetical protein VITISV_034560 [Vitis vinifera]
8 Hb_001508_010 0.1028319307 - - conserved hypothetical protein [Ricinus communis]
9 Hb_077242_020 0.1037263005 - - ribosomal protein S4 (mitochondrion) [Ricinus communis]
10 Hb_001490_020 0.1039761114 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_010053_060 0.1093582031 - - ATP-binding cassette transporter, putative [Ricinus communis]
12 Hb_006040_020 0.1155259529 - - ATPase subunit 8 (mitochondrion) [Hevea brasiliensis]
13 Hb_131816_010 0.1156013991 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
14 Hb_007044_030 0.1190430676 - - Os06g0273400 [Oryza sativa Japonica Group]
15 Hb_000879_260 0.119943379 - - PREDICTED: F-box/kelch-repeat protein At5g43190 [Jatropha curcas]
16 Hb_002010_010 0.122490464 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
17 Hb_000336_130 0.1237947599 - - Triacylglycerol lipase 2 precursor, putative [Ricinus communis]
18 Hb_000938_050 0.1240864984 - - hypothetical protein JCGZ_09640 [Jatropha curcas]
19 Hb_161881_010 0.1245927729 - - laccase, putative [Ricinus communis]
20 Hb_012528_040 0.1247883413 - - -

Gene co-expression network

sample Hb_101462_010 Hb_101462_010 Hb_000373_140 Hb_000373_140 Hb_101462_010--Hb_000373_140 Hb_000123_070 Hb_000123_070 Hb_101462_010--Hb_000123_070 Hb_004208_040 Hb_004208_040 Hb_101462_010--Hb_004208_040 Hb_079902_010 Hb_079902_010 Hb_101462_010--Hb_079902_010 Hb_004987_040 Hb_004987_040 Hb_101462_010--Hb_004987_040 Hb_004375_020 Hb_004375_020 Hb_101462_010--Hb_004375_020 Hb_000373_140--Hb_004208_040 Hb_000373_140--Hb_079902_010 Hb_000373_140--Hb_004987_040 Hb_000373_140--Hb_004375_020 Hb_000373_140--Hb_000123_070 Hb_161881_010 Hb_161881_010 Hb_000123_070--Hb_161881_010 Hb_012528_040 Hb_012528_040 Hb_000123_070--Hb_012528_040 Hb_007595_030 Hb_007595_030 Hb_000123_070--Hb_007595_030 Hb_000938_050 Hb_000938_050 Hb_000123_070--Hb_000938_050 Hb_004208_040--Hb_004987_040 Hb_003144_040 Hb_003144_040 Hb_004208_040--Hb_003144_040 Hb_131816_010 Hb_131816_010 Hb_004208_040--Hb_131816_010 Hb_010172_020 Hb_010172_020 Hb_004208_040--Hb_010172_020 Hb_001508_010 Hb_001508_010 Hb_079902_010--Hb_001508_010 Hb_077242_020 Hb_077242_020 Hb_079902_010--Hb_077242_020 Hb_002395_040 Hb_002395_040 Hb_079902_010--Hb_002395_040 Hb_079902_010--Hb_004208_040 Hb_004987_040--Hb_004375_020 Hb_006040_020 Hb_006040_020 Hb_004987_040--Hb_006040_020 Hb_010053_060 Hb_010053_060 Hb_004987_040--Hb_010053_060 Hb_004987_040--Hb_131816_010 Hb_004375_020--Hb_004208_040 Hb_004375_020--Hb_000123_070 Hb_004375_020--Hb_010053_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0288216 0.0221404 0.0222828 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0207238 1.19156

CAGE analysis