Hb_101705_040

Information

Type -
Description -
Location Contig101705: 18830-20955
Sequence    

Annotation

kegg
ID rcu:RCOM_0787730
description cytochrome P450, putative (EC:1.14.13.87)
nr
ID XP_002531103.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P93149
description Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2
trembl
ID B9SYN4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0787730 PE=3 SV=1
Gene Ontology
ID GO:0005506
description licodione synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101705_040 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000090_010 0.0555741439 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
3 Hb_004994_230 0.0636675404 transcription factor TF Family: LIM Pollen-specific protein SF3, putative [Ricinus communis]
4 Hb_028818_020 0.0761844914 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Jatropha curcas]
5 Hb_000155_230 0.0840786855 - - rac gtpase, putative [Ricinus communis]
6 Hb_034507_030 0.0903340215 - - PREDICTED: laccase-4-like [Jatropha curcas]
7 Hb_001105_150 0.0906979551 - - GERMIN-LIKE protein 10 [Populus trichocarpa]
8 Hb_003906_080 0.1007911511 - - Peroxidase 66 precursor, putative [Ricinus communis]
9 Hb_006483_020 0.1012528091 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
10 Hb_001123_300 0.1030730215 - - hypothetical protein POPTR_0003s16270g [Populus trichocarpa]
11 Hb_002311_020 0.1052685021 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
12 Hb_003623_060 0.112568315 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000062_040 0.1125714306 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]
14 Hb_000275_030 0.1130173128 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001900_050 0.1133927619 - - PREDICTED: uncharacterized protein LOC102609547 [Citrus sinensis]
16 Hb_002527_020 0.1135307747 - - PREDICTED: F-box protein At1g30790-like [Jatropha curcas]
17 Hb_002857_010 0.113736703 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
18 Hb_043346_010 0.1140717174 - - PREDICTED: uncharacterized protein LOC105761922 [Gossypium raimondii]
19 Hb_001695_050 0.1145777536 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
20 Hb_008493_010 0.116094081 - - hypothetical protein JCGZ_10529 [Jatropha curcas]

Gene co-expression network

sample Hb_101705_040 Hb_101705_040 Hb_000090_010 Hb_000090_010 Hb_101705_040--Hb_000090_010 Hb_004994_230 Hb_004994_230 Hb_101705_040--Hb_004994_230 Hb_028818_020 Hb_028818_020 Hb_101705_040--Hb_028818_020 Hb_000155_230 Hb_000155_230 Hb_101705_040--Hb_000155_230 Hb_034507_030 Hb_034507_030 Hb_101705_040--Hb_034507_030 Hb_001105_150 Hb_001105_150 Hb_101705_040--Hb_001105_150 Hb_000090_010--Hb_004994_230 Hb_000090_010--Hb_034507_030 Hb_006483_020 Hb_006483_020 Hb_000090_010--Hb_006483_020 Hb_002311_020 Hb_002311_020 Hb_000090_010--Hb_002311_020 Hb_000090_010--Hb_028818_020 Hb_004994_230--Hb_034507_030 Hb_004994_230--Hb_006483_020 Hb_004994_230--Hb_002311_020 Hb_000805_060 Hb_000805_060 Hb_004994_230--Hb_000805_060 Hb_028818_020--Hb_000155_230 Hb_028818_020--Hb_001105_150 Hb_001123_300 Hb_001123_300 Hb_028818_020--Hb_001123_300 Hb_028818_020--Hb_004994_230 Hb_028818_020--Hb_034507_030 Hb_000155_230--Hb_001105_150 Hb_140595_030 Hb_140595_030 Hb_000155_230--Hb_140595_030 Hb_000155_230--Hb_001123_300 Hb_140595_020 Hb_140595_020 Hb_000155_230--Hb_140595_020 Hb_034507_030--Hb_006483_020 Hb_001014_180 Hb_001014_180 Hb_034507_030--Hb_001014_180 Hb_000462_040 Hb_000462_040 Hb_034507_030--Hb_000462_040 Hb_007281_010 Hb_007281_010 Hb_034507_030--Hb_007281_010 Hb_001105_150--Hb_140595_030 Hb_001105_150--Hb_001123_300 Hb_002675_220 Hb_002675_220 Hb_001105_150--Hb_002675_220 Hb_001104_070 Hb_001104_070 Hb_001105_150--Hb_001104_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.343907 0.122686 7.27394 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0745464 13.7332

CAGE analysis