Hb_101733_020

Information

Type -
Description -
Location Contig101733: 6756-9643
Sequence    

Annotation

kegg
ID pop:POPTR_0008s18410g
description POPTRDRAFT_766615; hypothetical protein
nr
ID XP_012085875.1
description PREDICTED: mitogen-activated protein kinase kinase 9-like [Jatropha curcas]
swissprot
ID Q9FX43
description Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana GN=MKK9 PE=1 SV=1
trembl
ID A0A067JS01
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17830 PE=4 SV=1
Gene Ontology
ID GO:0004672
description mitogen-activated protein kinase kinase 9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101733_020 0.0 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Jatropha curcas]
2 Hb_081445_010 0.0006066823 - - hypothetical protein JCGZ_04541 [Jatropha curcas]
3 Hb_000672_070 0.0092254435 - - PREDICTED: uncharacterized protein LOC105631678 [Jatropha curcas]
4 Hb_048826_010 0.0203133973 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB28-like [Jatropha curcas]
5 Hb_067197_020 0.0207544486 - - -
6 Hb_002582_090 0.0229772808 - - PREDICTED: cinnamoyl-CoA reductase 1-like [Sesamum indicum]
7 Hb_010896_010 0.031887118 - - -
8 Hb_132148_010 0.0326658896 - - hypothetical protein CICLE_v10006890mg, partial [Citrus clementina]
9 Hb_001268_360 0.0389720603 - - PREDICTED: uncharacterized protein LOC104447679 [Eucalyptus grandis]
10 Hb_002127_010 0.0481174531 - - Aluminum activated malate transporter family protein, putative [Theobroma cacao]
11 Hb_168436_010 0.0566494234 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
12 Hb_003766_030 0.0581686987 - - PREDICTED: nuclear transport factor 2-like [Gossypium raimondii]
13 Hb_021409_060 0.0613605094 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
14 Hb_001373_120 0.0625581919 - - Uncharacterized protein TCM_031358 [Theobroma cacao]
15 Hb_008637_010 0.0668313857 - - Major latex protein, putative [Ricinus communis]
16 Hb_000264_200 0.0732887902 - - PREDICTED: tetraspanin-19-like [Jatropha curcas]
17 Hb_000120_140 0.0735586716 - - hypothetical protein POPTR_0009s05160g [Populus trichocarpa]
18 Hb_011671_300 0.0745057714 - - 14.3 kDa oleosin [Jatropha curcas]
19 Hb_004899_160 0.0822091865 - - -
20 Hb_004712_100 0.0882645206 - - hypothetical protein CICLE_v10003434mg, partial [Citrus clementina]

Gene co-expression network

sample Hb_101733_020 Hb_101733_020 Hb_081445_010 Hb_081445_010 Hb_101733_020--Hb_081445_010 Hb_000672_070 Hb_000672_070 Hb_101733_020--Hb_000672_070 Hb_048826_010 Hb_048826_010 Hb_101733_020--Hb_048826_010 Hb_067197_020 Hb_067197_020 Hb_101733_020--Hb_067197_020 Hb_002582_090 Hb_002582_090 Hb_101733_020--Hb_002582_090 Hb_010896_010 Hb_010896_010 Hb_101733_020--Hb_010896_010 Hb_081445_010--Hb_000672_070 Hb_081445_010--Hb_067197_020 Hb_081445_010--Hb_048826_010 Hb_081445_010--Hb_002582_090 Hb_081445_010--Hb_010896_010 Hb_000672_070--Hb_048826_010 Hb_000672_070--Hb_002582_090 Hb_132148_010 Hb_132148_010 Hb_000672_070--Hb_132148_010 Hb_000672_070--Hb_067197_020 Hb_048826_010--Hb_002582_090 Hb_048826_010--Hb_132148_010 Hb_003766_030 Hb_003766_030 Hb_048826_010--Hb_003766_030 Hb_067197_020--Hb_010896_010 Hb_001268_360 Hb_001268_360 Hb_067197_020--Hb_001268_360 Hb_002127_010 Hb_002127_010 Hb_067197_020--Hb_002127_010 Hb_002582_090--Hb_132148_010 Hb_002582_090--Hb_003766_030 Hb_010896_010--Hb_001268_360 Hb_010896_010--Hb_002127_010 Hb_168436_010 Hb_168436_010 Hb_010896_010--Hb_168436_010 Hb_021409_060 Hb_021409_060 Hb_010896_010--Hb_021409_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0409063 0.0107991 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis