Hb_102761_010

Information

Type -
Description -
Location Contig102761: 1458-2171
Sequence    

Annotation

kegg
ID pop:POPTR_0004s06050g
description POPTRDRAFT_855146; hypothetical protein
nr
ID KDP21143.1
description hypothetical protein JCGZ_21614 [Jatropha curcas]
swissprot
ID Q8RWZ5
description G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1
trembl
ID A0A067JEE7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21614 PE=3 SV=1
Gene Ontology
ID GO:0004687
description g-type lectin s-receptor-like serine threonine-protein kinase sd2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01134: 1606-1997
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_102761_010 0.0 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
2 Hb_004530_010 0.0889341438 - - PREDICTED: uncharacterized protein LOC104898079 [Beta vulgaris subsp. vulgaris]
3 Hb_014510_030 0.0980517568 - - hypothetical protein VITISV_027576 [Vitis vinifera]
4 Hb_000415_080 0.100223461 - - -
5 Hb_004896_030 0.1008631078 - - hypothetical protein VITISV_007475 [Vitis vinifera]
6 Hb_010721_040 0.1015244334 transcription factor TF Family: M-type unnamed protein product [Vitis vinifera]
7 Hb_000627_110 0.1054882236 - - cellulose synthase, putative [Ricinus communis]
8 Hb_000997_370 0.1149317494 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
9 Hb_094484_010 0.1175265109 - - kinase, putative [Ricinus communis]
10 Hb_040245_010 0.1217651557 - - hypothetical protein CISIN_1g039575mg, partial [Citrus sinensis]
11 Hb_151870_010 0.1274914611 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
12 Hb_001248_140 0.128450431 - - Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative [Ricinus communis]
13 Hb_003073_030 0.1332487945 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000199_090 0.1344522639 - - Tetrapyrrole-binding family protein [Populus trichocarpa]
15 Hb_002740_060 0.1351122919 - - PREDICTED: pectin acetylesterase 12 [Jatropha curcas]
16 Hb_029386_010 0.1365232943 - - RALF-LIKE 27 family protein [Populus trichocarpa]
17 Hb_005092_070 0.1367580379 - - Oligopeptide transporter, putative [Ricinus communis]
18 Hb_000265_030 0.1373131975 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
19 Hb_005622_040 0.1410144648 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
20 Hb_089124_010 0.1412426155 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]

Gene co-expression network

sample Hb_102761_010 Hb_102761_010 Hb_004530_010 Hb_004530_010 Hb_102761_010--Hb_004530_010 Hb_014510_030 Hb_014510_030 Hb_102761_010--Hb_014510_030 Hb_000415_080 Hb_000415_080 Hb_102761_010--Hb_000415_080 Hb_004896_030 Hb_004896_030 Hb_102761_010--Hb_004896_030 Hb_010721_040 Hb_010721_040 Hb_102761_010--Hb_010721_040 Hb_000627_110 Hb_000627_110 Hb_102761_010--Hb_000627_110 Hb_044380_010 Hb_044380_010 Hb_004530_010--Hb_044380_010 Hb_004530_010--Hb_010721_040 Hb_000997_370 Hb_000997_370 Hb_004530_010--Hb_000997_370 Hb_003714_030 Hb_003714_030 Hb_004530_010--Hb_003714_030 Hb_001248_140 Hb_001248_140 Hb_004530_010--Hb_001248_140 Hb_000199_090 Hb_000199_090 Hb_014510_030--Hb_000199_090 Hb_014510_030--Hb_000627_110 Hb_003073_030 Hb_003073_030 Hb_014510_030--Hb_003073_030 Hb_014510_030--Hb_004896_030 Hb_040245_010 Hb_040245_010 Hb_014510_030--Hb_040245_010 Hb_014510_030--Hb_000415_080 Hb_000415_080--Hb_040245_010 Hb_000415_080--Hb_003073_030 Hb_000415_080--Hb_000627_110 Hb_000415_080--Hb_000199_090 Hb_004896_030--Hb_000627_110 Hb_002740_060 Hb_002740_060 Hb_004896_030--Hb_002740_060 Hb_004896_030--Hb_000199_090 Hb_114893_010 Hb_114893_010 Hb_004896_030--Hb_114893_010 Hb_029386_010 Hb_029386_010 Hb_004896_030--Hb_029386_010 Hb_094484_010 Hb_094484_010 Hb_010721_040--Hb_094484_010 Hb_000343_090 Hb_000343_090 Hb_010721_040--Hb_000343_090 Hb_025161_030 Hb_025161_030 Hb_010721_040--Hb_025161_030 Hb_008714_030 Hb_008714_030 Hb_010721_040--Hb_008714_030 Hb_000627_110--Hb_000199_090 Hb_000627_110--Hb_040245_010 Hb_000627_110--Hb_029386_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0287038 0.106249 0.441042 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.201254 1.22684

CAGE analysis