Hb_103118_010

Information

Type -
Description -
Location Contig103118: 2085-5271
Sequence    

Annotation

kegg
ID rcu:RCOM_0658050
description hypothetical protein
nr
ID XP_012083714.1
description PREDICTED: uncharacterized protein LOC105643231 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JY27
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14642 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01287: 2361-3134 , PASA_asmbl_01288: 3783-4642 , PASA_asmbl_01289: 4815-5158
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103118_010 0.0 - - PREDICTED: uncharacterized protein LOC105643231 [Jatropha curcas]
2 Hb_000061_210 0.0588964837 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR1 isoform X1 [Jatropha curcas]
3 Hb_012675_050 0.0736491172 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000861_020 0.0793869223 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105631286 [Jatropha curcas]
5 Hb_003688_150 0.0849480045 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
6 Hb_002408_020 0.0855947939 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
7 Hb_000046_050 0.0866945475 - - PREDICTED: LEC14B homolog [Jatropha curcas]
8 Hb_004324_270 0.0871697884 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
9 Hb_011909_100 0.0872768949 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001049_110 0.0878771246 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
11 Hb_086639_040 0.0889504694 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
12 Hb_155159_030 0.0922140077 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
13 Hb_000783_020 0.0935654829 - - PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial [Jatropha curcas]
14 Hb_002811_130 0.0936952031 - - Zeta-carotene desaturase, chloroplast precursor, putative [Ricinus communis]
15 Hb_001546_060 0.0951272385 - - PREDICTED: uncharacterized protein LOC105133943 isoform X4 [Populus euphratica]
16 Hb_082609_010 0.0951548396 - - PREDICTED: uncharacterized protein LOC105644299 [Jatropha curcas]
17 Hb_018133_090 0.0954853138 - - conserved hypothetical protein [Ricinus communis]
18 Hb_015941_020 0.0962455731 - - -
19 Hb_032258_030 0.0965585061 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647563 [Jatropha curcas]
20 Hb_003020_220 0.0972223088 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_103118_010 Hb_103118_010 Hb_000061_210 Hb_000061_210 Hb_103118_010--Hb_000061_210 Hb_012675_050 Hb_012675_050 Hb_103118_010--Hb_012675_050 Hb_000861_020 Hb_000861_020 Hb_103118_010--Hb_000861_020 Hb_003688_150 Hb_003688_150 Hb_103118_010--Hb_003688_150 Hb_002408_020 Hb_002408_020 Hb_103118_010--Hb_002408_020 Hb_000046_050 Hb_000046_050 Hb_103118_010--Hb_000046_050 Hb_008453_030 Hb_008453_030 Hb_000061_210--Hb_008453_030 Hb_000061_210--Hb_002408_020 Hb_000061_210--Hb_012675_050 Hb_000421_220 Hb_000421_220 Hb_000061_210--Hb_000421_220 Hb_001049_110 Hb_001049_110 Hb_000061_210--Hb_001049_110 Hb_011909_100 Hb_011909_100 Hb_012675_050--Hb_011909_100 Hb_000107_160 Hb_000107_160 Hb_012675_050--Hb_000107_160 Hb_012675_050--Hb_000046_050 Hb_012675_050--Hb_002408_020 Hb_105123_010 Hb_105123_010 Hb_000861_020--Hb_105123_010 Hb_000631_080 Hb_000631_080 Hb_000861_020--Hb_000631_080 Hb_086639_040 Hb_086639_040 Hb_000861_020--Hb_086639_040 Hb_000861_020--Hb_000061_210 Hb_002154_100 Hb_002154_100 Hb_000861_020--Hb_002154_100 Hb_000783_020 Hb_000783_020 Hb_003688_150--Hb_000783_020 Hb_000120_460 Hb_000120_460 Hb_003688_150--Hb_000120_460 Hb_001619_070 Hb_001619_070 Hb_003688_150--Hb_001619_070 Hb_001318_270 Hb_001318_270 Hb_003688_150--Hb_001318_270 Hb_003688_150--Hb_086639_040 Hb_000260_030 Hb_000260_030 Hb_002408_020--Hb_000260_030 Hb_004324_270 Hb_004324_270 Hb_002408_020--Hb_004324_270 Hb_029879_130 Hb_029879_130 Hb_002408_020--Hb_029879_130 Hb_001322_110 Hb_001322_110 Hb_002408_020--Hb_001322_110 Hb_000046_050--Hb_004324_270 Hb_032264_070 Hb_032264_070 Hb_000046_050--Hb_032264_070 Hb_003540_240 Hb_003540_240 Hb_000046_050--Hb_003540_240 Hb_000046_050--Hb_000061_210 Hb_000046_050--Hb_000107_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.06745 6.98282 9.11083 7.69905 13.6869 16.5689
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.5634 23.8411 20.6764 12.254 23.5638

CAGE analysis