Hb_103339_010

Information

Type -
Description -
Location Contig103339: 37-927
Sequence    

Annotation

kegg
ID rcu:RCOM_1371720
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_002531444.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID P02750
description Leucine-rich alpha-2-glycoprotein OS=Homo sapiens GN=LRG1 PE=1 SV=2
trembl
ID B9SZM5
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1371720 PE=4 SV=1
Gene Ontology
ID GO:0003824
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103339_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_004007_080 0.0952802519 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
3 Hb_000527_030 0.0955474439 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
4 Hb_004422_030 0.1076149802 - - PREDICTED: serine/threonine-protein kinase SAPK7-like [Jatropha curcas]
5 Hb_006519_020 0.1134652083 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
6 Hb_169753_010 0.1145559525 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
7 Hb_000083_280 0.1261250668 - - copper ion binding protein, putative [Ricinus communis]
8 Hb_005918_020 0.1263415073 - - PREDICTED: protein HOTHEAD [Jatropha curcas]
9 Hb_010267_020 0.1298489622 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
10 Hb_000816_080 0.1313279845 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
11 Hb_158845_010 0.1322963808 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Jatropha curcas]
12 Hb_074660_010 0.1331304482 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
13 Hb_113974_010 0.1331326106 - - DNA binding protein, putative [Ricinus communis]
14 Hb_028187_010 0.1338896287 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
15 Hb_007681_020 0.1346725066 - - transferase, putative [Ricinus communis]
16 Hb_004459_030 0.1356701293 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
17 Hb_001153_230 0.1365157128 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
18 Hb_000445_320 0.1368061296 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
19 Hb_000316_070 0.1374606497 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
20 Hb_015299_040 0.1410335912 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 [Jatropha curcas]

Gene co-expression network

sample Hb_103339_010 Hb_103339_010 Hb_004007_080 Hb_004007_080 Hb_103339_010--Hb_004007_080 Hb_000527_030 Hb_000527_030 Hb_103339_010--Hb_000527_030 Hb_004422_030 Hb_004422_030 Hb_103339_010--Hb_004422_030 Hb_006519_020 Hb_006519_020 Hb_103339_010--Hb_006519_020 Hb_169753_010 Hb_169753_010 Hb_103339_010--Hb_169753_010 Hb_000083_280 Hb_000083_280 Hb_103339_010--Hb_000083_280 Hb_004007_080--Hb_000527_030 Hb_004007_080--Hb_006519_020 Hb_052530_010 Hb_052530_010 Hb_004007_080--Hb_052530_010 Hb_000816_080 Hb_000816_080 Hb_004007_080--Hb_000816_080 Hb_088118_010 Hb_088118_010 Hb_004007_080--Hb_088118_010 Hb_002453_040 Hb_002453_040 Hb_000527_030--Hb_002453_040 Hb_000527_030--Hb_052530_010 Hb_074660_010 Hb_074660_010 Hb_000527_030--Hb_074660_010 Hb_004241_160 Hb_004241_160 Hb_000527_030--Hb_004241_160 Hb_000527_030--Hb_000083_280 Hb_002918_220 Hb_002918_220 Hb_004422_030--Hb_002918_220 Hb_004225_160 Hb_004225_160 Hb_004422_030--Hb_004225_160 Hb_004422_030--Hb_000083_280 Hb_001439_240 Hb_001439_240 Hb_004422_030--Hb_001439_240 Hb_039812_010 Hb_039812_010 Hb_004422_030--Hb_039812_010 Hb_010267_020 Hb_010267_020 Hb_004422_030--Hb_010267_020 Hb_022406_010 Hb_022406_010 Hb_006519_020--Hb_022406_010 Hb_001606_040 Hb_001606_040 Hb_006519_020--Hb_001606_040 Hb_001040_050 Hb_001040_050 Hb_006519_020--Hb_001040_050 Hb_007681_020 Hb_007681_020 Hb_006519_020--Hb_007681_020 Hb_006519_020--Hb_169753_010 Hb_002205_160 Hb_002205_160 Hb_169753_010--Hb_002205_160 Hb_169753_010--Hb_010267_020 Hb_007441_290 Hb_007441_290 Hb_169753_010--Hb_007441_290 Hb_169753_010--Hb_004007_080 Hb_169753_010--Hb_004422_030 Hb_000083_280--Hb_039812_010 Hb_000283_090 Hb_000283_090 Hb_000083_280--Hb_000283_090 Hb_113974_010 Hb_113974_010 Hb_000083_280--Hb_113974_010 Hb_000083_280--Hb_004007_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0854041 1.39776 0.344683 0.0239528 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0186006 0.0934868

CAGE analysis