Hb_103806_010

Information

Type -
Description -
Location Contig103806: 58-609
Sequence    

Annotation

kegg
ID rcu:RCOM_1514550
description aldose-1-epimerase, putative (EC:5.1.3.3)
nr
ID XP_012080544.1
description PREDICTED: aldose 1-epimerase [Jatropha curcas]
swissprot
ID Q96C23
description Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1
trembl
ID B9R970
description Aldose 1-epimerase OS=Ricinus communis GN=RCOM_1514550 PE=3 SV=1
Gene Ontology
ID GO:0004034
description aldose 1-epimerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103806_010 0.0 - - PREDICTED: aldose 1-epimerase [Jatropha curcas]
2 Hb_004116_010 0.196790335 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_003376_240 0.2627236525 - - conserved hypothetical protein [Ricinus communis]
4 Hb_011649_040 0.2709181285 - - hypothetical protein CISIN_1g039733mg [Citrus sinensis]
5 Hb_145745_020 0.2800794028 - - Cell wall-associated hydrolase, partial [Medicago truncatula]
6 Hb_010171_010 0.2896875044 - - hypothetical protein VITISV_033646 [Vitis vinifera]
7 Hb_002411_020 0.2901394158 - - hypothetical protein JCGZ_24577 [Jatropha curcas]
8 Hb_106692_020 0.2989310378 - - NADH dehydrogenase subunit F, partial (chloroplast) [Hevea sp. Gillespie 4272]
9 Hb_003952_050 0.2994494919 - - beta-galactosidase, putative [Ricinus communis]
10 Hb_005496_100 0.3001238551 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
11 Hb_000275_100 0.3035529071 - - BnaC09g26910D [Brassica napus]
12 Hb_000329_520 0.3039284603 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
13 Hb_188063_040 0.317376532 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
14 Hb_010121_020 0.3224243696 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_012049_010 0.3234437437 - - hypothetical protein B456_002G055100 [Gossypium raimondii]
16 Hb_000684_400 0.3238473537 - - PREDICTED: uncharacterized protein LOC105642159 [Jatropha curcas]
17 Hb_013253_030 0.3238759758 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
18 Hb_000504_210 0.3262172042 - - hypothetical protein JCGZ_10251 [Jatropha curcas]
19 Hb_019845_010 0.327672989 - - protease inhibitor protein [Hevea brasiliensis]
20 Hb_115031_010 0.3284670386 - - photosystem II P680 chlorophyll A apoprotein, partial (chloroplast) [Oenothera grandiflora]

Gene co-expression network

sample Hb_103806_010 Hb_103806_010 Hb_004116_010 Hb_004116_010 Hb_103806_010--Hb_004116_010 Hb_003376_240 Hb_003376_240 Hb_103806_010--Hb_003376_240 Hb_011649_040 Hb_011649_040 Hb_103806_010--Hb_011649_040 Hb_145745_020 Hb_145745_020 Hb_103806_010--Hb_145745_020 Hb_010171_010 Hb_010171_010 Hb_103806_010--Hb_010171_010 Hb_002411_020 Hb_002411_020 Hb_103806_010--Hb_002411_020 Hb_010121_020 Hb_010121_020 Hb_004116_010--Hb_010121_020 Hb_114874_010 Hb_114874_010 Hb_004116_010--Hb_114874_010 Hb_115572_040 Hb_115572_040 Hb_004116_010--Hb_115572_040 Hb_004116_010--Hb_003376_240 Hb_003607_100 Hb_003607_100 Hb_004116_010--Hb_003607_100 Hb_009572_010 Hb_009572_010 Hb_003376_240--Hb_009572_010 Hb_000185_020 Hb_000185_020 Hb_003376_240--Hb_000185_020 Hb_000504_210 Hb_000504_210 Hb_003376_240--Hb_000504_210 Hb_003376_240--Hb_115572_040 Hb_007594_020 Hb_007594_020 Hb_003376_240--Hb_007594_020 Hb_086691_010 Hb_086691_010 Hb_003376_240--Hb_086691_010 Hb_011649_040--Hb_145745_020 Hb_000275_100 Hb_000275_100 Hb_011649_040--Hb_000275_100 Hb_011649_040--Hb_010171_010 Hb_141708_010 Hb_141708_010 Hb_011649_040--Hb_141708_010 Hb_000015_220 Hb_000015_220 Hb_011649_040--Hb_000015_220 Hb_012049_010 Hb_012049_010 Hb_011649_040--Hb_012049_010 Hb_145745_020--Hb_141708_010 Hb_145745_020--Hb_000275_100 Hb_145745_020--Hb_012049_010 Hb_145745_020--Hb_000015_220 Hb_001674_050 Hb_001674_050 Hb_145745_020--Hb_001674_050 Hb_010171_010--Hb_000275_100 Hb_010171_010--Hb_145745_020 Hb_000483_320 Hb_000483_320 Hb_010171_010--Hb_000483_320 Hb_007237_100 Hb_007237_100 Hb_010171_010--Hb_007237_100 Hb_000915_190 Hb_000915_190 Hb_010171_010--Hb_000915_190 Hb_130250_010 Hb_130250_010 Hb_002411_020--Hb_130250_010 Hb_000890_110 Hb_000890_110 Hb_002411_020--Hb_000890_110 Hb_134813_010 Hb_134813_010 Hb_002411_020--Hb_134813_010 Hb_000300_680 Hb_000300_680 Hb_002411_020--Hb_000300_680 Hb_001054_010 Hb_001054_010 Hb_002411_020--Hb_001054_010 Hb_021313_010 Hb_021313_010 Hb_002411_020--Hb_021313_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.040077 0.115205 0 0.0800609
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.114611 0 0 0 0.515371

CAGE analysis