Hb_103931_010

Information

Type -
Description -
Location Contig103931: 19-653
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103931_010 0.0 - - -
2 Hb_015085_010 0.0713155408 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
3 Hb_001053_100 0.074472512 - - DNA-damage-inducible protein f, putative [Ricinus communis]
4 Hb_000164_250 0.0772260438 - - hypothetical protein CISIN_1g040645mg [Citrus sinensis]
5 Hb_041067_010 0.0828499762 - - hypothetical protein JCGZ_00780 [Jatropha curcas]
6 Hb_032280_010 0.0848373782 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
7 Hb_000172_260 0.0863229335 - - PREDICTED: low affinity sulfate transporter 3 [Jatropha curcas]
8 Hb_003777_100 0.0873490621 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
9 Hb_000086_160 0.0904598544 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
10 Hb_000027_010 0.0910605423 - - -
11 Hb_002025_190 0.1053887158 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]
12 Hb_000628_100 0.1090734671 - - hypothetical protein MTR_1g019660 [Medicago truncatula]
13 Hb_005183_020 0.1097369952 - - hypothetical protein JCGZ_04285 [Jatropha curcas]
14 Hb_004148_030 0.1102100344 - - PREDICTED: protein RAFTIN 1B-like [Gossypium raimondii]
15 Hb_006052_080 0.1114826497 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH140-like [Populus euphratica]
16 Hb_000363_100 0.1129398602 - - -
17 Hb_074100_010 0.113406469 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
18 Hb_001104_290 0.1140844927 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
19 Hb_005463_120 0.1144440373 - - gibberellin 20-oxidase, putative [Ricinus communis]
20 Hb_181191_010 0.1154551521 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_103931_010 Hb_103931_010 Hb_015085_010 Hb_015085_010 Hb_103931_010--Hb_015085_010 Hb_001053_100 Hb_001053_100 Hb_103931_010--Hb_001053_100 Hb_000164_250 Hb_000164_250 Hb_103931_010--Hb_000164_250 Hb_041067_010 Hb_041067_010 Hb_103931_010--Hb_041067_010 Hb_032280_010 Hb_032280_010 Hb_103931_010--Hb_032280_010 Hb_000172_260 Hb_000172_260 Hb_103931_010--Hb_000172_260 Hb_015085_010--Hb_041067_010 Hb_015085_010--Hb_001053_100 Hb_015085_010--Hb_032280_010 Hb_015085_010--Hb_000164_250 Hb_003747_080 Hb_003747_080 Hb_015085_010--Hb_003747_080 Hb_000086_160 Hb_000086_160 Hb_001053_100--Hb_000086_160 Hb_001053_100--Hb_041067_010 Hb_001396_080 Hb_001396_080 Hb_001053_100--Hb_001396_080 Hb_005183_020 Hb_005183_020 Hb_001053_100--Hb_005183_020 Hb_003777_100 Hb_003777_100 Hb_000164_250--Hb_003777_100 Hb_000164_250--Hb_032280_010 Hb_000164_250--Hb_000172_260 Hb_000164_250--Hb_041067_010 Hb_010261_050 Hb_010261_050 Hb_000164_250--Hb_010261_050 Hb_004148_030 Hb_004148_030 Hb_041067_010--Hb_004148_030 Hb_041067_010--Hb_032280_010 Hb_002217_480 Hb_002217_480 Hb_041067_010--Hb_002217_480 Hb_041067_010--Hb_000172_260 Hb_032280_010--Hb_000172_260 Hb_032280_010--Hb_004148_030 Hb_032280_010--Hb_003777_100 Hb_000172_260--Hb_003777_100 Hb_000172_260--Hb_004148_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.0138 3939.18 839.534 25603.1 32.18 76.8267
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 145.486 3.85797

CAGE analysis