Hb_104000_010

Information

Type -
Description -
Location Contig104000: 378-892
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_104000_010 0.0 - - -
2 Hb_001930_090 0.1357718312 - - DNA binding protein, putative [Ricinus communis]
3 Hb_173281_010 0.2494510559 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
4 Hb_144484_010 0.2632553665 - - calcineurin-like phosphoesterase [Manihot esculenta]
5 Hb_003144_050 0.2657287589 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
6 Hb_011909_110 0.2811931343 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
7 Hb_002043_120 0.28382327 - - protein with unknown function [Ricinus communis]
8 Hb_001959_130 0.2925667068 - - transporter, putative [Ricinus communis]
9 Hb_024154_020 0.2926160962 - - polyphenol oxidase [Hevea brasiliensis]
10 Hb_000920_370 0.2962274351 - - hypothetical protein JCGZ_24527 [Jatropha curcas]
11 Hb_000001_120 0.3018013685 - - hypothetical protein JCGZ_03063 [Jatropha curcas]
12 Hb_000130_030 0.3021263695 - - PREDICTED: small ubiquitin-related modifier 2-A-like [Eucalyptus grandis]
13 Hb_003777_170 0.3053662888 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001635_020 0.3133999266 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
15 Hb_002045_200 0.3153230545 - - PREDICTED: beta-carotene isomerase D27, chloroplastic [Jatropha curcas]
16 Hb_000749_240 0.3161195984 - - conserved hypothetical protein [Ricinus communis]
17 Hb_052941_010 0.3207465854 - - PREDICTED: probable peroxidase 61 [Jatropha curcas]
18 Hb_000896_110 0.3218510259 - - -
19 Hb_005568_010 0.3230334134 - - -
20 Hb_001902_120 0.3232479825 - - PREDICTED: uncharacterized protein LOC105648455 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_104000_010 Hb_104000_010 Hb_001930_090 Hb_001930_090 Hb_104000_010--Hb_001930_090 Hb_173281_010 Hb_173281_010 Hb_104000_010--Hb_173281_010 Hb_144484_010 Hb_144484_010 Hb_104000_010--Hb_144484_010 Hb_003144_050 Hb_003144_050 Hb_104000_010--Hb_003144_050 Hb_011909_110 Hb_011909_110 Hb_104000_010--Hb_011909_110 Hb_002043_120 Hb_002043_120 Hb_104000_010--Hb_002043_120 Hb_001930_090--Hb_144484_010 Hb_003777_170 Hb_003777_170 Hb_001930_090--Hb_003777_170 Hb_001930_090--Hb_011909_110 Hb_024154_020 Hb_024154_020 Hb_001930_090--Hb_024154_020 Hb_001930_090--Hb_173281_010 Hb_003286_020 Hb_003286_020 Hb_173281_010--Hb_003286_020 Hb_003913_140 Hb_003913_140 Hb_173281_010--Hb_003913_140 Hb_000749_240 Hb_000749_240 Hb_173281_010--Hb_000749_240 Hb_001741_040 Hb_001741_040 Hb_173281_010--Hb_001741_040 Hb_173281_010--Hb_003144_050 Hb_001902_120 Hb_001902_120 Hb_173281_010--Hb_001902_120 Hb_012022_130 Hb_012022_130 Hb_144484_010--Hb_012022_130 Hb_001504_140 Hb_001504_140 Hb_144484_010--Hb_001504_140 Hb_001635_020 Hb_001635_020 Hb_144484_010--Hb_001635_020 Hb_001712_040 Hb_001712_040 Hb_144484_010--Hb_001712_040 Hb_000922_120 Hb_000922_120 Hb_144484_010--Hb_000922_120 Hb_000167_030 Hb_000167_030 Hb_144484_010--Hb_000167_030 Hb_148209_060 Hb_148209_060 Hb_003144_050--Hb_148209_060 Hb_000130_030 Hb_000130_030 Hb_003144_050--Hb_000130_030 Hb_088538_010 Hb_088538_010 Hb_003144_050--Hb_088538_010 Hb_003144_050--Hb_003286_020 Hb_001959_130 Hb_001959_130 Hb_011909_110--Hb_001959_130 Hb_015430_010 Hb_015430_010 Hb_011909_110--Hb_015430_010 Hb_011909_110--Hb_002043_120 Hb_011909_110--Hb_000167_030 Hb_000613_160 Hb_000613_160 Hb_011909_110--Hb_000613_160 Hb_008215_030 Hb_008215_030 Hb_011909_110--Hb_008215_030 Hb_012022_100 Hb_012022_100 Hb_002043_120--Hb_012022_100 Hb_002704_050 Hb_002704_050 Hb_002043_120--Hb_002704_050 Hb_000792_120 Hb_000792_120 Hb_002043_120--Hb_000792_120 Hb_000592_060 Hb_000592_060 Hb_002043_120--Hb_000592_060 Hb_002043_120--Hb_000613_160 Hb_001579_140 Hb_001579_140 Hb_002043_120--Hb_001579_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.168226 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.452648 0.1778 0.278544 0 0

CAGE analysis