Hb_104014_020

Information

Type -
Description -
Location Contig104014: 9967-11533
Sequence    

Annotation

kegg
ID tcc:TCM_025258
description Receptor-like protein kinase
nr
ID XP_012066206.1
description PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L6J8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23785 PE=3 SV=1
Gene Ontology
ID GO:0016301
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_104014_020 0.0 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
2 Hb_003025_170 0.0184501177 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]
3 Hb_000077_040 0.0328331768 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
4 Hb_002973_060 0.0365337669 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001593_040 0.0423803706 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
6 Hb_000115_030 0.0458960769 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
7 Hb_003786_030 0.05103203 - - BnaUnng00830D [Brassica napus]
8 Hb_064445_020 0.0559957744 - - PREDICTED: serine carboxypeptidase-like 34 [Populus euphratica]
9 Hb_000724_040 0.0605950654 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]
10 Hb_002326_010 0.0650407317 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
11 Hb_151290_010 0.0662853532 - - unnamed protein product [Vitis vinifera]
12 Hb_000023_100 0.0668221675 - - Mechanosensitive channel of small conductance-like 10 [Theobroma cacao]
13 Hb_005228_050 0.0678573313 - - PREDICTED: uncharacterized protein LOC104896168 [Beta vulgaris subsp. vulgaris]
14 Hb_008453_050 0.0760800764 - - PREDICTED: peroxidase 64 [Jatropha curcas]
15 Hb_135887_010 0.079481487 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
16 Hb_096907_010 0.0799409062 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
17 Hb_000224_190 0.0813447581 - - zinc finger protein, putative [Ricinus communis]
18 Hb_144550_010 0.0823302642 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
19 Hb_154038_010 0.0829705303 - - cytochrome P450, putative [Ricinus communis]
20 Hb_132880_010 0.0834780439 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]

Gene co-expression network

sample Hb_104014_020 Hb_104014_020 Hb_003025_170 Hb_003025_170 Hb_104014_020--Hb_003025_170 Hb_000077_040 Hb_000077_040 Hb_104014_020--Hb_000077_040 Hb_002973_060 Hb_002973_060 Hb_104014_020--Hb_002973_060 Hb_001593_040 Hb_001593_040 Hb_104014_020--Hb_001593_040 Hb_000115_030 Hb_000115_030 Hb_104014_020--Hb_000115_030 Hb_003786_030 Hb_003786_030 Hb_104014_020--Hb_003786_030 Hb_003025_170--Hb_000077_040 Hb_003025_170--Hb_001593_040 Hb_003025_170--Hb_002973_060 Hb_064445_020 Hb_064445_020 Hb_003025_170--Hb_064445_020 Hb_002326_010 Hb_002326_010 Hb_003025_170--Hb_002326_010 Hb_000077_040--Hb_001593_040 Hb_000077_040--Hb_000115_030 Hb_000077_040--Hb_002973_060 Hb_000077_040--Hb_064445_020 Hb_000724_040 Hb_000724_040 Hb_002973_060--Hb_000724_040 Hb_002973_060--Hb_003786_030 Hb_002973_060--Hb_000115_030 Hb_005228_050 Hb_005228_050 Hb_002973_060--Hb_005228_050 Hb_001593_040--Hb_064445_020 Hb_001593_040--Hb_002326_010 Hb_008453_050 Hb_008453_050 Hb_001593_040--Hb_008453_050 Hb_154038_010 Hb_154038_010 Hb_001593_040--Hb_154038_010 Hb_096907_010 Hb_096907_010 Hb_000115_030--Hb_096907_010 Hb_001437_170 Hb_001437_170 Hb_000115_030--Hb_001437_170 Hb_000160_120 Hb_000160_120 Hb_000115_030--Hb_000160_120 Hb_003786_030--Hb_000724_040 Hb_135887_010 Hb_135887_010 Hb_003786_030--Hb_135887_010 Hb_003786_030--Hb_005228_050 Hb_011108_010 Hb_011108_010 Hb_003786_030--Hb_011108_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0167804 0.0548111 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0825044

CAGE analysis