Hb_104764_020

Information

Type -
Description -
Location Contig104764: 423-724
Sequence    

Annotation

kegg
ID -
description -
nr
ID EMS45267.1
description hypothetical protein TRIUR3_08295 [Triticum urartu]
swissprot
ID -
description -
trembl
ID T1LHY4
description Uncharacterized protein OS=Triticum urartu PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_104764_020 0.0 - - hypothetical protein TRIUR3_08295 [Triticum urartu]
2 Hb_000367_070 0.3061916441 - - hypothetical protein JCGZ_11697 [Jatropha curcas]
3 Hb_001226_010 0.3224058222 transcription factor TF Family: RWP-RK conserved hypothetical protein [Ricinus communis]
4 Hb_011476_020 0.3264717893 - - PREDICTED: glutamate dehydrogenase 2-like [Jatropha curcas]
5 Hb_067034_020 0.3344128082 - - PREDICTED: iridoid synthase [Jatropha curcas]
6 Hb_000836_150 0.3380991689 - - hypothetical protein POPTR_0003s13070g [Populus trichocarpa]
7 Hb_159327_010 0.3407100217 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
8 Hb_001322_030 0.3408432158 - - triacylglycerol lipase, putative [Ricinus communis]
9 Hb_002609_250 0.343985268 - - PREDICTED: starch-binding domain-containing protein 1-like [Jatropha curcas]
10 Hb_007382_130 0.3536070804 - - glycerophosphodiester phosphodiesterase, putative [Ricinus communis]
11 Hb_008971_030 0.3578940378 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000155_090 0.358619744 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
13 Hb_128486_010 0.3593058534 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
14 Hb_000072_340 0.360634887 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000740_020 0.366117808 transcription factor TF Family: MYB-related asymmetric leaves1 and rough sheath, putative [Ricinus communis]
16 Hb_001269_250 0.3661470412 - - PREDICTED: factor of DNA methylation 1-like [Jatropha curcas]
17 Hb_000062_200 0.3668357003 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
18 Hb_092706_010 0.3670542514 - - PREDICTED: beta-galactosidase-like [Jatropha curcas]
19 Hb_133661_010 0.3695886478 - - hypothetical protein JCGZ_11734 [Jatropha curcas]
20 Hb_000649_340 0.3702434902 - - PREDICTED: dynein light chain 1, cytoplasmic [Jatropha curcas]

Gene co-expression network

sample Hb_104764_020 Hb_104764_020 Hb_000367_070 Hb_000367_070 Hb_104764_020--Hb_000367_070 Hb_001226_010 Hb_001226_010 Hb_104764_020--Hb_001226_010 Hb_011476_020 Hb_011476_020 Hb_104764_020--Hb_011476_020 Hb_067034_020 Hb_067034_020 Hb_104764_020--Hb_067034_020 Hb_000836_150 Hb_000836_150 Hb_104764_020--Hb_000836_150 Hb_159327_010 Hb_159327_010 Hb_104764_020--Hb_159327_010 Hb_000046_270 Hb_000046_270 Hb_000367_070--Hb_000046_270 Hb_000483_400 Hb_000483_400 Hb_000367_070--Hb_000483_400 Hb_062038_010 Hb_062038_010 Hb_000367_070--Hb_062038_010 Hb_000072_340 Hb_000072_340 Hb_000367_070--Hb_000072_340 Hb_015941_050 Hb_015941_050 Hb_000367_070--Hb_015941_050 Hb_001842_030 Hb_001842_030 Hb_000367_070--Hb_001842_030 Hb_001322_030 Hb_001322_030 Hb_001226_010--Hb_001322_030 Hb_034904_010 Hb_034904_010 Hb_001226_010--Hb_034904_010 Hb_001437_160 Hb_001437_160 Hb_001226_010--Hb_001437_160 Hb_000740_020 Hb_000740_020 Hb_001226_010--Hb_000740_020 Hb_103739_010 Hb_103739_010 Hb_001226_010--Hb_103739_010 Hb_007145_010 Hb_007145_010 Hb_001226_010--Hb_007145_010 Hb_013654_030 Hb_013654_030 Hb_011476_020--Hb_013654_030 Hb_011476_020--Hb_159327_010 Hb_001541_220 Hb_001541_220 Hb_011476_020--Hb_001541_220 Hb_146902_010 Hb_146902_010 Hb_011476_020--Hb_146902_010 Hb_000896_070 Hb_000896_070 Hb_011476_020--Hb_000896_070 Hb_119808_020 Hb_119808_020 Hb_011476_020--Hb_119808_020 Hb_067034_020--Hb_000836_150 Hb_067034_020--Hb_001541_220 Hb_067034_020--Hb_146902_010 Hb_001102_310 Hb_001102_310 Hb_067034_020--Hb_001102_310 Hb_067034_020--Hb_119808_020 Hb_067034_020--Hb_000740_020 Hb_000836_150--Hb_001437_160 Hb_004728_030 Hb_004728_030 Hb_000836_150--Hb_004728_030 Hb_132840_120 Hb_132840_120 Hb_000836_150--Hb_132840_120 Hb_000836_150--Hb_000740_020 Hb_012092_070 Hb_012092_070 Hb_000836_150--Hb_012092_070 Hb_159327_010--Hb_013654_030 Hb_008971_030 Hb_008971_030 Hb_159327_010--Hb_008971_030 Hb_015175_060 Hb_015175_060 Hb_159327_010--Hb_015175_060 Hb_004308_020 Hb_004308_020 Hb_159327_010--Hb_004308_020 Hb_004785_050 Hb_004785_050 Hb_159327_010--Hb_004785_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.69216 1.95688 5.19647 1.09756 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 4.22576 0.965298 0 0

CAGE analysis