Hb_105085_010

Information

Type -
Description -
Location Contig105085: 3351-4597
Sequence    

Annotation

kegg
ID rcu:RCOM_1617460
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID KDP20096.1
description hypothetical protein JCGZ_05865 [Jatropha curcas]
swissprot
ID H2DH18
description Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV=1
trembl
ID A0A067J8K5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05865 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp736a12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105085_010 0.0 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
2 Hb_002804_050 0.1593787896 - - PREDICTED: uncharacterized protein LOC105628258 [Jatropha curcas]
3 Hb_002735_040 0.1617541813 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
4 Hb_005122_060 0.1826899224 - - unnamed protein product [Vitis vinifera]
5 Hb_002843_050 0.1880936611 - - scab resistance family protein [Populus trichocarpa]
6 Hb_006615_100 0.2033434533 - - PREDICTED: uncharacterized protein LOC105640683 isoform X1 [Jatropha curcas]
7 Hb_011344_170 0.2052278172 - - PREDICTED: UDP-glucuronate 4-epimerase 4-like, partial [Camelina sativa]
8 Hb_001989_020 0.2069995713 - - hypothetical protein JCGZ_15521 [Jatropha curcas]
9 Hb_001529_060 0.207176305 - - PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Jatropha curcas]
10 Hb_000375_370 0.216667468 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
11 Hb_001377_050 0.2174041059 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
12 Hb_088542_010 0.2217913787 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
13 Hb_018344_010 0.2233325252 - - PREDICTED: endochitinase 2-like [Populus euphratica]
14 Hb_003157_010 0.2242113443 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
15 Hb_002783_050 0.2267977366 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000445_300 0.2268272176 - - PREDICTED: wall-associated receptor kinase 5-like [Eucalyptus grandis]
17 Hb_000787_100 0.226897499 - - PREDICTED: thiamine thiazole synthase, chloroplastic [Jatropha curcas]
18 Hb_005052_010 0.2286503991 - - PREDICTED: uncharacterized protein LOC103339315 [Prunus mume]
19 Hb_002035_090 0.2294791185 - - -
20 Hb_129067_010 0.2302625963 - - Cytochrome P450 superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_105085_010 Hb_105085_010 Hb_002804_050 Hb_002804_050 Hb_105085_010--Hb_002804_050 Hb_002735_040 Hb_002735_040 Hb_105085_010--Hb_002735_040 Hb_005122_060 Hb_005122_060 Hb_105085_010--Hb_005122_060 Hb_002843_050 Hb_002843_050 Hb_105085_010--Hb_002843_050 Hb_006615_100 Hb_006615_100 Hb_105085_010--Hb_006615_100 Hb_011344_170 Hb_011344_170 Hb_105085_010--Hb_011344_170 Hb_002804_050--Hb_006615_100 Hb_001529_060 Hb_001529_060 Hb_002804_050--Hb_001529_060 Hb_002849_080 Hb_002849_080 Hb_002804_050--Hb_002849_080 Hb_002783_050 Hb_002783_050 Hb_002804_050--Hb_002783_050 Hb_003106_150 Hb_003106_150 Hb_002804_050--Hb_003106_150 Hb_010128_070 Hb_010128_070 Hb_002804_050--Hb_010128_070 Hb_002735_040--Hb_002804_050 Hb_002735_040--Hb_006615_100 Hb_002735_040--Hb_002843_050 Hb_002735_040--Hb_005122_060 Hb_012384_050 Hb_012384_050 Hb_002735_040--Hb_012384_050 Hb_006816_410 Hb_006816_410 Hb_005122_060--Hb_006816_410 Hb_006588_050 Hb_006588_050 Hb_005122_060--Hb_006588_050 Hb_002105_080 Hb_002105_080 Hb_005122_060--Hb_002105_080 Hb_006816_300 Hb_006816_300 Hb_005122_060--Hb_006816_300 Hb_000375_370 Hb_000375_370 Hb_005122_060--Hb_000375_370 Hb_015763_020 Hb_015763_020 Hb_005122_060--Hb_015763_020 Hb_002843_050--Hb_002804_050 Hb_055773_010 Hb_055773_010 Hb_002843_050--Hb_055773_010 Hb_000735_120 Hb_000735_120 Hb_002843_050--Hb_000735_120 Hb_002843_050--Hb_005122_060 Hb_001259_030 Hb_001259_030 Hb_002843_050--Hb_001259_030 Hb_007680_020 Hb_007680_020 Hb_006615_100--Hb_007680_020 Hb_006615_100--Hb_010128_070 Hb_000281_010 Hb_000281_010 Hb_006615_100--Hb_000281_010 Hb_001195_150 Hb_001195_150 Hb_006615_100--Hb_001195_150 Hb_000997_410 Hb_000997_410 Hb_006615_100--Hb_000997_410 Hb_005052_010 Hb_005052_010 Hb_011344_170--Hb_005052_010 Hb_007307_030 Hb_007307_030 Hb_011344_170--Hb_007307_030 Hb_164010_070 Hb_164010_070 Hb_011344_170--Hb_164010_070 Hb_000853_120 Hb_000853_120 Hb_011344_170--Hb_000853_120 Hb_017434_060 Hb_017434_060 Hb_011344_170--Hb_017434_060 Hb_001989_020 Hb_001989_020 Hb_011344_170--Hb_001989_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.4162 5.21613 0.526679 0.300204 4.75753 3.97716
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.272743 0.128699 1.88748 4.0257 0.262133

CAGE analysis