Hb_105328_020

Information

Type -
Description -
Location Contig105328: 45120-54101
Sequence    

Annotation

kegg
ID rcu:RCOM_0812140
description phosphoprotein phosphatase, putative (EC:3.1.3.67)
nr
ID XP_012065393.1
description PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
swissprot
ID O08586
description Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN OS=Mus musculus GN=Pten PE=1 SV=1
trembl
ID A0A067LF72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22122 PE=4 SV=1
Gene Ontology
ID GO:0005829
description phosphatidylinositol -trisphosphate 3-phosphatase and dual-specificity protein phosphatase pten

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01815: 45160-53936
cDNA
(Sanger)
(ID:Location)		 008_D11.ab1: 53463-53757

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105328_020 0.0 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
2 Hb_000170_090 0.0455687091 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
3 Hb_000345_380 0.0522727664 - - PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Jatropha curcas]
4 Hb_011037_030 0.0560471906 - - PREDICTED: uncharacterized protein LOC105641407 [Jatropha curcas]
5 Hb_006588_170 0.056659463 - - PREDICTED: OTU domain-containing protein At3g57810 [Jatropha curcas]
6 Hb_013399_020 0.056851649 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
7 Hb_000156_010 0.0578189036 - - phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus communis]
8 Hb_000327_270 0.0597785801 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
9 Hb_001635_160 0.0620158195 - - hypothetical protein JCGZ_24810 [Jatropha curcas]
10 Hb_020378_030 0.0622440926 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
11 Hb_000590_050 0.0623430172 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]
12 Hb_168978_030 0.0631606918 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
13 Hb_000890_060 0.0665627066 - - PREDICTED: sucrose nonfermenting 4-like protein [Jatropha curcas]
14 Hb_000617_180 0.0672960349 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
15 Hb_000035_470 0.0684882952 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
16 Hb_001377_310 0.0686299821 transcription factor TF Family: Coactivator p15 PREDICTED: uncharacterized protein LOC105642839 [Jatropha curcas]
17 Hb_028512_020 0.069121571 - - PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
18 Hb_093458_040 0.069454101 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
19 Hb_002235_170 0.0696438792 - - hypothetical protein CISIN_1g010208mg [Citrus sinensis]
20 Hb_000976_140 0.0698398587 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_105328_020 Hb_105328_020 Hb_000170_090 Hb_000170_090 Hb_105328_020--Hb_000170_090 Hb_000345_380 Hb_000345_380 Hb_105328_020--Hb_000345_380 Hb_011037_030 Hb_011037_030 Hb_105328_020--Hb_011037_030 Hb_006588_170 Hb_006588_170 Hb_105328_020--Hb_006588_170 Hb_013399_020 Hb_013399_020 Hb_105328_020--Hb_013399_020 Hb_000156_010 Hb_000156_010 Hb_105328_020--Hb_000156_010 Hb_001377_310 Hb_001377_310 Hb_000170_090--Hb_001377_310 Hb_004586_220 Hb_004586_220 Hb_000170_090--Hb_004586_220 Hb_000170_090--Hb_013399_020 Hb_000976_140 Hb_000976_140 Hb_000170_090--Hb_000976_140 Hb_000345_160 Hb_000345_160 Hb_000170_090--Hb_000345_160 Hb_000345_380--Hb_011037_030 Hb_000030_190 Hb_000030_190 Hb_000345_380--Hb_000030_190 Hb_000789_310 Hb_000789_310 Hb_000345_380--Hb_000789_310 Hb_008406_200 Hb_008406_200 Hb_000345_380--Hb_008406_200 Hb_001409_020 Hb_001409_020 Hb_000345_380--Hb_001409_020 Hb_011037_030--Hb_000156_010 Hb_006455_120 Hb_006455_120 Hb_011037_030--Hb_006455_120 Hb_054865_150 Hb_054865_150 Hb_011037_030--Hb_054865_150 Hb_003750_050 Hb_003750_050 Hb_011037_030--Hb_003750_050 Hb_006588_170--Hb_013399_020 Hb_006588_170--Hb_000170_090 Hb_006588_170--Hb_000345_380 Hb_001860_030 Hb_001860_030 Hb_006588_170--Hb_001860_030 Hb_000107_230 Hb_000107_230 Hb_006588_170--Hb_000107_230 Hb_000923_010 Hb_000923_010 Hb_013399_020--Hb_000923_010 Hb_000441_220 Hb_000441_220 Hb_013399_020--Hb_000441_220 Hb_003683_020 Hb_003683_020 Hb_013399_020--Hb_003683_020 Hb_093458_040 Hb_093458_040 Hb_013399_020--Hb_093458_040 Hb_000156_010--Hb_003750_050 Hb_000156_010--Hb_054865_150 Hb_012498_010 Hb_012498_010 Hb_000156_010--Hb_012498_010 Hb_005291_050 Hb_005291_050 Hb_000156_010--Hb_005291_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.9569 13.9576 15.1014 18.3512 12.7574 21.1334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.473 11.942 13.7095 17.6646 14.2598

CAGE analysis