Hb_105377_010

Information

Type -
Description -
Location Contig105377: 1182-1904
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001414mg
description hypothetical protein
nr
ID XP_007213654.1
description hypothetical protein PRUPE_ppa001414mg [Prunus persica]
swissprot
ID O65482
description Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1
trembl
ID M5WZV5
description Serine/threonine-protein kinase OS=Prunus persica GN=PRUPE_ppa001414mg PE=3 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase at1g11410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105377_010 0.0 - - hypothetical protein PRUPE_ppa001414mg [Prunus persica]
2 Hb_003598_020 0.0495060507 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12 [Jatropha curcas]
3 Hb_004880_040 0.0776998605 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
4 Hb_003185_040 0.0874465667 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Populus euphratica]
5 Hb_000336_010 0.0896616201 transcription factor TF Family: C3H zinc finger family protein [Populus trichocarpa]
6 Hb_004724_280 0.0921973419 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005731_040 0.0998428458 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
8 Hb_123713_010 0.1004894663 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_002078_070 0.1020540438 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001856_210 0.1032247436 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
11 Hb_001123_330 0.1060814503 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
12 Hb_005353_010 0.1093449571 - - Pectinesterase-1 precursor, putative [Ricinus communis]
13 Hb_087717_010 0.1112722857 - - hypothetical protein JCGZ_01246 [Jatropha curcas]
14 Hb_007317_050 0.1116877367 - - hypothetical protein POPTR_0009s16550g [Populus trichocarpa]
15 Hb_164853_010 0.1143064132 - - Patatin precursor, putative [Ricinus communis]
16 Hb_000445_260 0.1146594524 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
17 Hb_005666_010 0.1148070761 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
18 Hb_003055_160 0.1158770992 - - PREDICTED: S-linalool synthase isoform X1 [Jatropha curcas]
19 Hb_001775_140 0.1207784484 - - Phytosulfokine 3 precursor, putative isoform 2 [Theobroma cacao]
20 Hb_000175_080 0.1211454205 - - hypothetical protein JCGZ_06123 [Jatropha curcas]

Gene co-expression network

sample Hb_105377_010 Hb_105377_010 Hb_003598_020 Hb_003598_020 Hb_105377_010--Hb_003598_020 Hb_004880_040 Hb_004880_040 Hb_105377_010--Hb_004880_040 Hb_003185_040 Hb_003185_040 Hb_105377_010--Hb_003185_040 Hb_000336_010 Hb_000336_010 Hb_105377_010--Hb_000336_010 Hb_004724_280 Hb_004724_280 Hb_105377_010--Hb_004724_280 Hb_005731_040 Hb_005731_040 Hb_105377_010--Hb_005731_040 Hb_003598_020--Hb_005731_040 Hb_003598_020--Hb_004880_040 Hb_097292_010 Hb_097292_010 Hb_003598_020--Hb_097292_010 Hb_089040_010 Hb_089040_010 Hb_003598_020--Hb_089040_010 Hb_001856_210 Hb_001856_210 Hb_003598_020--Hb_001856_210 Hb_004880_040--Hb_003185_040 Hb_004880_040--Hb_001856_210 Hb_000878_080 Hb_000878_080 Hb_004880_040--Hb_000878_080 Hb_003085_070 Hb_003085_070 Hb_004880_040--Hb_003085_070 Hb_000059_190 Hb_000059_190 Hb_003185_040--Hb_000059_190 Hb_003185_040--Hb_003085_070 Hb_001123_330 Hb_001123_330 Hb_003185_040--Hb_001123_330 Hb_003185_040--Hb_000336_010 Hb_000175_080 Hb_000175_080 Hb_000336_010--Hb_000175_080 Hb_000336_010--Hb_004724_280 Hb_000336_010--Hb_001123_330 Hb_003420_010 Hb_003420_010 Hb_000336_010--Hb_003420_010 Hb_004724_280--Hb_001123_330 Hb_004724_280--Hb_000175_080 Hb_004724_280--Hb_003420_010 Hb_007474_010 Hb_007474_010 Hb_004724_280--Hb_007474_010 Hb_002078_070 Hb_002078_070 Hb_004724_280--Hb_002078_070 Hb_005731_040--Hb_097292_010 Hb_000586_110 Hb_000586_110 Hb_005731_040--Hb_000586_110 Hb_026218_010 Hb_026218_010 Hb_005731_040--Hb_026218_010 Hb_007846_030 Hb_007846_030 Hb_005731_040--Hb_007846_030 Hb_000861_060 Hb_000861_060 Hb_005731_040--Hb_000861_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.443219 12.666 18.684 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.39182

CAGE analysis