Hb_106321_010

Information

Type -
Description -
Location Contig106321: 2680-5533
Sequence    

Annotation

kegg
ID rcu:RCOM_0496860
description glutathione s-transferase, putative (EC:4.4.1.5)
nr
ID XP_012066742.1
description PREDICTED: probable glutathione S-transferase [Jatropha curcas]
swissprot
ID P32110
description Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1
trembl
ID A0A067LDC2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00297 PE=3 SV=1
Gene Ontology
ID GO:0016740
description probable glutathione s-transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106321_010 0.0 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
2 Hb_005168_030 0.0637234907 - - unknown [Zea mays]
3 Hb_123560_020 0.0888566017 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
4 Hb_000215_420 0.1070459436 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
5 Hb_000705_090 0.1193986065 - - PREDICTED: uncharacterized protein LOC100246830 [Vitis vinifera]
6 Hb_011440_010 0.1202111038 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
7 Hb_002003_030 0.1246195984 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
8 Hb_004586_110 0.124859678 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
9 Hb_000844_090 0.1334362738 - - PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
10 Hb_006573_260 0.133740485 - - -
11 Hb_000471_010 0.1353854956 - - ATP binding protein, putative [Ricinus communis]
12 Hb_004519_010 0.1396958348 - - PREDICTED: basic form of pathogenesis-related protein 1-like [Jatropha curcas]
13 Hb_009296_060 0.1397246282 - - glutathione s-transferase, putative [Ricinus communis]
14 Hb_116469_010 0.1423655193 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
15 Hb_005333_210 0.1454078976 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
16 Hb_009486_120 0.1456832658 - - hypothetical protein PRUPE_ppa004149mg [Prunus persica]
17 Hb_000336_280 0.1481890734 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
18 Hb_000566_110 0.1485519782 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Prunus mume]
19 Hb_164300_010 0.1505680071 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
20 Hb_000684_490 0.1509231996 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]

Gene co-expression network

sample Hb_106321_010 Hb_106321_010 Hb_005168_030 Hb_005168_030 Hb_106321_010--Hb_005168_030 Hb_123560_020 Hb_123560_020 Hb_106321_010--Hb_123560_020 Hb_000215_420 Hb_000215_420 Hb_106321_010--Hb_000215_420 Hb_000705_090 Hb_000705_090 Hb_106321_010--Hb_000705_090 Hb_011440_010 Hb_011440_010 Hb_106321_010--Hb_011440_010 Hb_002003_030 Hb_002003_030 Hb_106321_010--Hb_002003_030 Hb_005168_030--Hb_123560_020 Hb_005168_030--Hb_011440_010 Hb_004586_110 Hb_004586_110 Hb_005168_030--Hb_004586_110 Hb_002960_010 Hb_002960_010 Hb_005168_030--Hb_002960_010 Hb_005168_030--Hb_002003_030 Hb_123560_020--Hb_011440_010 Hb_009486_120 Hb_009486_120 Hb_123560_020--Hb_009486_120 Hb_000336_280 Hb_000336_280 Hb_123560_020--Hb_000336_280 Hb_001186_120 Hb_001186_120 Hb_123560_020--Hb_001186_120 Hb_000101_370 Hb_000101_370 Hb_000215_420--Hb_000101_370 Hb_004519_010 Hb_004519_010 Hb_000215_420--Hb_004519_010 Hb_000705_100 Hb_000705_100 Hb_000215_420--Hb_000705_100 Hb_000215_420--Hb_000705_090 Hb_001019_210 Hb_001019_210 Hb_000215_420--Hb_001019_210 Hb_000705_090--Hb_000705_100 Hb_164300_010 Hb_164300_010 Hb_000705_090--Hb_164300_010 Hb_000705_090--Hb_005168_030 Hb_000705_090--Hb_002003_030 Hb_001300_140 Hb_001300_140 Hb_011440_010--Hb_001300_140 Hb_009150_060 Hb_009150_060 Hb_011440_010--Hb_009150_060 Hb_000753_180 Hb_000753_180 Hb_011440_010--Hb_000753_180 Hb_001358_120 Hb_001358_120 Hb_011440_010--Hb_001358_120 Hb_116469_010 Hb_116469_010 Hb_002003_030--Hb_116469_010 Hb_150730_010 Hb_150730_010 Hb_002003_030--Hb_150730_010 Hb_009778_050 Hb_009778_050 Hb_002003_030--Hb_009778_050 Hb_000057_180 Hb_000057_180 Hb_002003_030--Hb_000057_180 Hb_011861_020 Hb_011861_020 Hb_002003_030--Hb_011861_020 Hb_000471_010 Hb_000471_010 Hb_002003_030--Hb_000471_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.76246 21.4742 4.38844 0 0.0182857
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0950764 0 0 35.3831 7.29274

CAGE analysis