Hb_106810_010

Information

Type -
Description -
Location Contig106810: 216-719
Sequence    

Annotation

kegg
ID rcu:RCOM_1310790
description receptor serine/threonine kinase, putative
nr
ID XP_002527020.1
description receptor serine/threonine kinase, putative [Ricinus communis]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID B9SM01
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1310790 PE=3 SV=1
Gene Ontology
ID GO:0004713
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106810_010 0.0 - - receptor serine/threonine kinase, putative [Ricinus communis]
2 Hb_005618_020 0.0801188432 - - hypothetical protein RCOM_1342750 [Ricinus communis]
3 Hb_000836_310 0.0878441008 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 30 [Jatropha curcas]
4 Hb_000086_600 0.0913615229 - - -
5 Hb_015978_040 0.0918256224 - - PREDICTED: uncharacterized protein LOC105642609 [Jatropha curcas]
6 Hb_022768_010 0.0947792296 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Populus euphratica]
7 Hb_032966_010 0.0954700419 - - receptor serine/threonine kinase, putative [Ricinus communis]
8 Hb_047955_010 0.1026969431 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
9 Hb_034132_010 0.1042950431 - - hypothetical protein B456_007G015400 [Gossypium raimondii]
10 Hb_005843_080 0.1076487704 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
11 Hb_117602_010 0.110196152 - - dimethylaniline monooxygenase, putative [Ricinus communis]
12 Hb_000032_150 0.114768404 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
13 Hb_027506_060 0.1173501736 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
14 Hb_004032_220 0.123309201 - - Calmodulin, putative [Ricinus communis]
15 Hb_002252_030 0.1234245833 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
16 Hb_001257_040 0.1236994817 - - PREDICTED: uncharacterized protein LOC105640055 [Jatropha curcas]
17 Hb_001565_050 0.1258913546 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
18 Hb_031862_150 0.1272665638 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
19 Hb_000016_220 0.1301010827 transcription factor TF Family: AP2 CRT/DRE binding factor 1 [Hevea brasiliensis]
20 Hb_000230_210 0.1309149707 - - PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]

Gene co-expression network

sample Hb_106810_010 Hb_106810_010 Hb_005618_020 Hb_005618_020 Hb_106810_010--Hb_005618_020 Hb_000836_310 Hb_000836_310 Hb_106810_010--Hb_000836_310 Hb_000086_600 Hb_000086_600 Hb_106810_010--Hb_000086_600 Hb_015978_040 Hb_015978_040 Hb_106810_010--Hb_015978_040 Hb_022768_010 Hb_022768_010 Hb_106810_010--Hb_022768_010 Hb_032966_010 Hb_032966_010 Hb_106810_010--Hb_032966_010 Hb_005618_020--Hb_000086_600 Hb_125201_010 Hb_125201_010 Hb_005618_020--Hb_125201_010 Hb_004586_120 Hb_004586_120 Hb_005618_020--Hb_004586_120 Hb_117602_010 Hb_117602_010 Hb_005618_020--Hb_117602_010 Hb_000016_220 Hb_000016_220 Hb_005618_020--Hb_000016_220 Hb_000127_220 Hb_000127_220 Hb_000836_310--Hb_000127_220 Hb_004032_220 Hb_004032_220 Hb_000836_310--Hb_004032_220 Hb_012496_010 Hb_012496_010 Hb_000836_310--Hb_012496_010 Hb_000340_060 Hb_000340_060 Hb_000836_310--Hb_000340_060 Hb_000032_150 Hb_000032_150 Hb_000836_310--Hb_000032_150 Hb_000086_600--Hb_117602_010 Hb_009707_010 Hb_009707_010 Hb_000086_600--Hb_009707_010 Hb_114932_010 Hb_114932_010 Hb_000086_600--Hb_114932_010 Hb_005843_080 Hb_005843_080 Hb_000086_600--Hb_005843_080 Hb_147137_020 Hb_147137_020 Hb_000086_600--Hb_147137_020 Hb_005725_180 Hb_005725_180 Hb_015978_040--Hb_005725_180 Hb_034132_010 Hb_034132_010 Hb_015978_040--Hb_034132_010 Hb_015978_040--Hb_022768_010 Hb_015978_040--Hb_032966_010 Hb_001565_050 Hb_001565_050 Hb_015978_040--Hb_001565_050 Hb_005843_070 Hb_005843_070 Hb_015978_040--Hb_005843_070 Hb_031862_150 Hb_031862_150 Hb_022768_010--Hb_031862_150 Hb_022768_010--Hb_034132_010 Hb_022768_010--Hb_001565_050 Hb_005946_190 Hb_005946_190 Hb_022768_010--Hb_005946_190 Hb_022768_010--Hb_005725_180 Hb_032966_010--Hb_034132_010 Hb_116352_010 Hb_116352_010 Hb_032966_010--Hb_116352_010 Hb_032966_010--Hb_005843_070 Hb_032966_010--Hb_005725_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 21.2678 6.09502 1.76845 0 0.0508014
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.129699 0.194905

CAGE analysis