Hb_107495_060

Information

Type -
Description -
Location Contig107495: 84775-87375
Sequence    

Annotation

kegg
ID rcu:RCOM_1102540
description Cell division protein kinase, putative (EC:2.7.11.23)
nr
ID XP_002528049.1
description Cell division protein kinase, putative [Ricinus communis]
swissprot
ID F4I114
description Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana GN=At1g09600 PE=3 SV=1
trembl
ID B9SPY0
description Cell division protein kinase, putative OS=Ricinus communis GN=RCOM_1102540 PE=4 SV=1
Gene Ontology
ID GO:0005524
description probable serine threonine-protein kinase at1g09600 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_107495_060 0.0 - - Cell division protein kinase, putative [Ricinus communis]
2 Hb_072670_010 0.0792241416 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
3 Hb_087314_010 0.0967401823 - - -
4 Hb_000373_260 0.1154013063 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
5 Hb_180695_010 0.1240946693 - - hypothetical protein CICLE_v10013449mg [Citrus clementina]
6 Hb_005736_010 0.1245162553 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
7 Hb_033772_040 0.1254217614 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000172_310 0.126475202 - - PREDICTED: fasciclin-like arabinogalactan protein 21 [Jatropha curcas]
9 Hb_006573_270 0.1305137302 - - conserved hypothetical protein [Ricinus communis]
10 Hb_010926_020 0.1310536189 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]
11 Hb_148914_020 0.1341542534 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
12 Hb_011355_020 0.1446565246 - - extensin, proline-rich protein, putative [Ricinus communis]
13 Hb_005214_050 0.1448344134 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
14 Hb_000128_090 0.1450887848 - - Reticuline oxidase precursor, putative [Ricinus communis]
15 Hb_057018_010 0.1469303379 - - hypothetical protein JCGZ_04004 [Jatropha curcas]
16 Hb_000149_020 0.1491949985 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
17 Hb_048987_020 0.1609634716 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
18 Hb_002897_030 0.1615656007 - - PREDICTED: methylesterase 17 [Jatropha curcas]
19 Hb_034310_020 0.1637565769 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 [Jatropha curcas]
20 Hb_000616_100 0.1656645927 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_107495_060 Hb_107495_060 Hb_072670_010 Hb_072670_010 Hb_107495_060--Hb_072670_010 Hb_087314_010 Hb_087314_010 Hb_107495_060--Hb_087314_010 Hb_000373_260 Hb_000373_260 Hb_107495_060--Hb_000373_260 Hb_180695_010 Hb_180695_010 Hb_107495_060--Hb_180695_010 Hb_005736_010 Hb_005736_010 Hb_107495_060--Hb_005736_010 Hb_033772_040 Hb_033772_040 Hb_107495_060--Hb_033772_040 Hb_010926_020 Hb_010926_020 Hb_072670_010--Hb_010926_020 Hb_057018_010 Hb_057018_010 Hb_072670_010--Hb_057018_010 Hb_072670_010--Hb_005736_010 Hb_072670_010--Hb_087314_010 Hb_148914_020 Hb_148914_020 Hb_072670_010--Hb_148914_020 Hb_048987_020 Hb_048987_020 Hb_087314_010--Hb_048987_020 Hb_087314_010--Hb_180695_010 Hb_006721_060 Hb_006721_060 Hb_087314_010--Hb_006721_060 Hb_029576_070 Hb_029576_070 Hb_087314_010--Hb_029576_070 Hb_005214_050 Hb_005214_050 Hb_000373_260--Hb_005214_050 Hb_011355_020 Hb_011355_020 Hb_000373_260--Hb_011355_020 Hb_006026_020 Hb_006026_020 Hb_000373_260--Hb_006026_020 Hb_004970_100 Hb_004970_100 Hb_000373_260--Hb_004970_100 Hb_004031_050 Hb_004031_050 Hb_000373_260--Hb_004031_050 Hb_000149_020 Hb_000149_020 Hb_000373_260--Hb_000149_020 Hb_015934_100 Hb_015934_100 Hb_180695_010--Hb_015934_100 Hb_180695_010--Hb_048987_020 Hb_005916_040 Hb_005916_040 Hb_180695_010--Hb_005916_040 Hb_180695_010--Hb_033772_040 Hb_005736_010--Hb_010926_020 Hb_005736_010--Hb_057018_010 Hb_002511_050 Hb_002511_050 Hb_005736_010--Hb_002511_050 Hb_005736_010--Hb_033772_040 Hb_034310_020 Hb_034310_020 Hb_033772_040--Hb_034310_020 Hb_004319_100 Hb_004319_100 Hb_033772_040--Hb_004319_100 Hb_004474_020 Hb_004474_020 Hb_033772_040--Hb_004474_020 Hb_001529_010 Hb_001529_010 Hb_033772_040--Hb_001529_010 Hb_033772_040--Hb_010926_020 Hb_004899_380 Hb_004899_380 Hb_033772_040--Hb_004899_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0306589 0.0318185 0.130367 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0219935 0

CAGE analysis