Hb_108551_010

Information

Type -
Description -
Location Contig108551: 75-1459
Sequence    

Annotation

kegg
ID rcu:RCOM_1207340
description hypothetical protein
nr
ID XP_002530860.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SXY1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1207340 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_108551_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_025236_020 0.1614322134 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
3 Hb_003337_050 0.1667309665 - - PREDICTED: probable protein phosphatase 2C 78 [Jatropha curcas]
4 Hb_003077_060 0.1732121626 - - PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Jatropha curcas]
5 Hb_168509_020 0.1733727593 - - macrophage migration inhibitory factor family protein [Populus trichocarpa]
6 Hb_092458_010 0.1801002986 - - calmodulin binding protein, putative [Ricinus communis]
7 Hb_006925_060 0.1818559094 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
8 Hb_052434_010 0.1848970352 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
9 Hb_000771_070 0.1858813895 - - PREDICTED: plastidial pyruvate kinase 4, chloroplastic [Jatropha curcas]
10 Hb_000027_130 0.1868328901 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
11 Hb_000177_130 0.1878298792 - - wall-associated kinase, putative [Ricinus communis]
12 Hb_000001_010 0.1926802306 - - PREDICTED: uncharacterized protein LOC105648961 [Jatropha curcas]
13 Hb_012018_020 0.1936768919 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Eucalyptus grandis]
14 Hb_000169_060 0.1942352118 - - conserved hypothetical protein [Ricinus communis]
15 Hb_029576_100 0.1957612406 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
16 Hb_013786_010 0.1964975621 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_003529_230 0.1970580704 transcription factor TF Family: ERF -
18 Hb_063523_010 0.2014188658 - - -
19 Hb_002107_110 0.2021025008 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
20 Hb_005814_010 0.202726003 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_108551_010 Hb_108551_010 Hb_025236_020 Hb_025236_020 Hb_108551_010--Hb_025236_020 Hb_003337_050 Hb_003337_050 Hb_108551_010--Hb_003337_050 Hb_003077_060 Hb_003077_060 Hb_108551_010--Hb_003077_060 Hb_168509_020 Hb_168509_020 Hb_108551_010--Hb_168509_020 Hb_092458_010 Hb_092458_010 Hb_108551_010--Hb_092458_010 Hb_006925_060 Hb_006925_060 Hb_108551_010--Hb_006925_060 Hb_002343_020 Hb_002343_020 Hb_025236_020--Hb_002343_020 Hb_000421_020 Hb_000421_020 Hb_025236_020--Hb_000421_020 Hb_005814_010 Hb_005814_010 Hb_025236_020--Hb_005814_010 Hb_052434_010 Hb_052434_010 Hb_025236_020--Hb_052434_010 Hb_003529_230 Hb_003529_230 Hb_025236_020--Hb_003529_230 Hb_000771_070 Hb_000771_070 Hb_025236_020--Hb_000771_070 Hb_033045_010 Hb_033045_010 Hb_003337_050--Hb_033045_010 Hb_002518_270 Hb_002518_270 Hb_003337_050--Hb_002518_270 Hb_009803_030 Hb_009803_030 Hb_003337_050--Hb_009803_030 Hb_006970_150 Hb_006970_150 Hb_003337_050--Hb_006970_150 Hb_001946_060 Hb_001946_060 Hb_003337_050--Hb_001946_060 Hb_000265_020 Hb_000265_020 Hb_003337_050--Hb_000265_020 Hb_002107_110 Hb_002107_110 Hb_003077_060--Hb_002107_110 Hb_003077_060--Hb_092458_010 Hb_005867_030 Hb_005867_030 Hb_003077_060--Hb_005867_030 Hb_007416_170 Hb_007416_170 Hb_003077_060--Hb_007416_170 Hb_001619_020 Hb_001619_020 Hb_003077_060--Hb_001619_020 Hb_000237_070 Hb_000237_070 Hb_003077_060--Hb_000237_070 Hb_101034_020 Hb_101034_020 Hb_168509_020--Hb_101034_020 Hb_013786_010 Hb_013786_010 Hb_168509_020--Hb_013786_010 Hb_011038_020 Hb_011038_020 Hb_168509_020--Hb_011038_020 Hb_000417_250 Hb_000417_250 Hb_168509_020--Hb_000417_250 Hb_094439_010 Hb_094439_010 Hb_168509_020--Hb_094439_010 Hb_029576_100 Hb_029576_100 Hb_168509_020--Hb_029576_100 Hb_092458_010--Hb_002107_110 Hb_005433_030 Hb_005433_030 Hb_092458_010--Hb_005433_030 Hb_002615_010 Hb_002615_010 Hb_092458_010--Hb_002615_010 Hb_018633_010 Hb_018633_010 Hb_092458_010--Hb_018633_010 Hb_002010_020 Hb_002010_020 Hb_092458_010--Hb_002010_020 Hb_000001_010 Hb_000001_010 Hb_006925_060--Hb_000001_010 Hb_063523_010 Hb_063523_010 Hb_006925_060--Hb_063523_010 Hb_003680_250 Hb_003680_250 Hb_006925_060--Hb_003680_250 Hb_005628_050 Hb_005628_050 Hb_006925_060--Hb_005628_050 Hb_003751_050 Hb_003751_050 Hb_006925_060--Hb_003751_050 Hb_187991_010 Hb_187991_010 Hb_006925_060--Hb_187991_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.172243 2.68155 2.12578 0.200671 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0544027 0 0.0784467 1.29229 0.784426

CAGE analysis