Hb_109842_010

Information

Type -
Description -
Location Contig109842: 1384-2662
Sequence    

Annotation

kegg
ID rcu:RCOM_1431390
description hypothetical protein
nr
ID XP_012089072.1
description PREDICTED: uncharacterized protein LOC105647554 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JU54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23358 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_109842_010 0.0 - - PREDICTED: uncharacterized protein LOC105647554 isoform X2 [Jatropha curcas]
2 Hb_005306_110 0.0790354761 - - casein kinase, putative [Ricinus communis]
3 Hb_000165_030 0.0844291724 - - PREDICTED: uncharacterized protein LOC105645673 isoform X1 [Jatropha curcas]
4 Hb_009411_020 0.0852863747 - - PREDICTED: eukaryotic translation initiation factor 3 subunit E [Populus euphratica]
5 Hb_001504_150 0.0869816329 - - PREDICTED: DCN1-like protein 4 [Jatropha curcas]
6 Hb_000625_020 0.0888661982 - - conserved hypothetical protein [Ricinus communis]
7 Hb_168707_030 0.0906025883 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Populus euphratica]
8 Hb_000204_040 0.0913593676 - - PREDICTED: polyadenylate-binding protein-interacting protein 6 [Jatropha curcas]
9 Hb_003609_040 0.0914438576 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
10 Hb_000322_100 0.0921338187 - - PREDICTED: casein kinase I isoform delta-like [Jatropha curcas]
11 Hb_000943_070 0.0924660047 - - PREDICTED: uncharacterized protein LOC105635592 isoform X1 [Jatropha curcas]
12 Hb_004324_280 0.0934225791 - - PREDICTED: plastid division protein PDV1 [Jatropha curcas]
13 Hb_001439_150 0.0940893603 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15340, mitochondrial [Jatropha curcas]
14 Hb_001511_020 0.0944579788 - - PREDICTED: peroxisome biogenesis protein 22 [Jatropha curcas]
15 Hb_000001_020 0.0951529711 - - PREDICTED: homogentisate solanesyltransferase, chloroplastic [Jatropha curcas]
16 Hb_000162_090 0.0955176758 - - PREDICTED: methyltransferase-like protein 16 isoform X1 [Jatropha curcas]
17 Hb_000156_140 0.0962592764 - - Ribosomal protein L18ae/LX family protein [Theobroma cacao]
18 Hb_002774_070 0.0966754515 - - hypothetical protein EUGRSUZ_F00307 [Eucalyptus grandis]
19 Hb_000481_040 0.0984808523 - - developmentally regulated GTP-binding protein, putative [Ricinus communis]
20 Hb_000905_190 0.0985630488 - - PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Elaeis guineensis]

Gene co-expression network

sample Hb_109842_010 Hb_109842_010 Hb_005306_110 Hb_005306_110 Hb_109842_010--Hb_005306_110 Hb_000165_030 Hb_000165_030 Hb_109842_010--Hb_000165_030 Hb_009411_020 Hb_009411_020 Hb_109842_010--Hb_009411_020 Hb_001504_150 Hb_001504_150 Hb_109842_010--Hb_001504_150 Hb_000625_020 Hb_000625_020 Hb_109842_010--Hb_000625_020 Hb_168707_030 Hb_168707_030 Hb_109842_010--Hb_168707_030 Hb_033153_050 Hb_033153_050 Hb_005306_110--Hb_033153_050 Hb_001584_330 Hb_001584_330 Hb_005306_110--Hb_001584_330 Hb_001623_420 Hb_001623_420 Hb_005306_110--Hb_001623_420 Hb_000943_070 Hb_000943_070 Hb_005306_110--Hb_000943_070 Hb_000120_950 Hb_000120_950 Hb_005306_110--Hb_000120_950 Hb_003642_060 Hb_003642_060 Hb_005306_110--Hb_003642_060 Hb_000162_090 Hb_000162_090 Hb_000165_030--Hb_000162_090 Hb_000749_150 Hb_000749_150 Hb_000165_030--Hb_000749_150 Hb_002997_170 Hb_002997_170 Hb_000165_030--Hb_002997_170 Hb_000905_190 Hb_000905_190 Hb_000165_030--Hb_000905_190 Hb_000156_140 Hb_000156_140 Hb_000165_030--Hb_000156_140 Hb_009411_020--Hb_000156_140 Hb_001616_090 Hb_001616_090 Hb_009411_020--Hb_001616_090 Hb_002774_070 Hb_002774_070 Hb_009411_020--Hb_002774_070 Hb_024714_020 Hb_024714_020 Hb_009411_020--Hb_024714_020 Hb_001969_040 Hb_001969_040 Hb_009411_020--Hb_001969_040 Hb_000186_280 Hb_000186_280 Hb_009411_020--Hb_000186_280 Hb_000666_110 Hb_000666_110 Hb_001504_150--Hb_000666_110 Hb_005701_040 Hb_005701_040 Hb_001504_150--Hb_005701_040 Hb_019962_030 Hb_019962_030 Hb_001504_150--Hb_019962_030 Hb_007164_020 Hb_007164_020 Hb_001504_150--Hb_007164_020 Hb_000205_120 Hb_000205_120 Hb_001504_150--Hb_000205_120 Hb_000085_240 Hb_000085_240 Hb_001504_150--Hb_000085_240 Hb_004324_280 Hb_004324_280 Hb_000625_020--Hb_004324_280 Hb_000625_020--Hb_000165_030 Hb_000120_240 Hb_000120_240 Hb_000625_020--Hb_000120_240 Hb_003609_040 Hb_003609_040 Hb_000625_020--Hb_003609_040 Hb_000625_020--Hb_000162_090 Hb_000057_040 Hb_000057_040 Hb_168707_030--Hb_000057_040 Hb_168707_030--Hb_003642_060 Hb_001006_170 Hb_001006_170 Hb_168707_030--Hb_001006_170 Hb_001439_150 Hb_001439_150 Hb_168707_030--Hb_001439_150 Hb_000000_080 Hb_000000_080 Hb_168707_030--Hb_000000_080 Hb_004195_160 Hb_004195_160 Hb_168707_030--Hb_004195_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.0454 5.66253 6.07892 5.80325 14.2947 18.1001
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.82677 8.10688 11.9225 2.7173 1.72688

CAGE analysis