Hb_110562_020

Information

Type -
Description -
Location Contig110562: 5860-9192
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID KDP33401.1
description hypothetical protein JCGZ_12857 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067KB03
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12857 PE=3 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_110562_020 0.0 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
2 Hb_000172_730 0.0159578856 - - PREDICTED: cytochrome P450 CYP736A12-like [Nicotiana sylvestris]
3 Hb_000002_130 0.0295767441 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
4 Hb_030469_010 0.0431037775 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
5 Hb_000926_170 0.0723750543 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007040_030 0.078877202 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
7 Hb_000896_140 0.0794836734 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
8 Hb_110048_010 0.0811460237 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
9 Hb_119789_010 0.1008531704 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
10 Hb_156055_020 0.1095981161 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004899_160 0.1171975222 - - -
12 Hb_001511_130 0.1203645607 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
13 Hb_044026_010 0.130617079 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
14 Hb_008978_010 0.1365602856 - - transmembrane receptor, putative [Ricinus communis]
15 Hb_021409_060 0.1376695343 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
16 Hb_111908_010 0.138676678 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000473_010 0.1403006764 - - PREDICTED: galactolipase DONGLE, chloroplastic [Jatropha curcas]
18 Hb_168436_010 0.1422731787 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
19 Hb_000333_150 0.1427186058 - - hypothetical protein RCOM_0711500 [Ricinus communis]
20 Hb_000699_200 0.1458369766 - - hypothetical protein POPTR_0019s02340g [Populus trichocarpa]

Gene co-expression network

sample Hb_110562_020 Hb_110562_020 Hb_000172_730 Hb_000172_730 Hb_110562_020--Hb_000172_730 Hb_000002_130 Hb_000002_130 Hb_110562_020--Hb_000002_130 Hb_030469_010 Hb_030469_010 Hb_110562_020--Hb_030469_010 Hb_000926_170 Hb_000926_170 Hb_110562_020--Hb_000926_170 Hb_007040_030 Hb_007040_030 Hb_110562_020--Hb_007040_030 Hb_000896_140 Hb_000896_140 Hb_110562_020--Hb_000896_140 Hb_000172_730--Hb_030469_010 Hb_000172_730--Hb_000002_130 Hb_110048_010 Hb_110048_010 Hb_000172_730--Hb_110048_010 Hb_000172_730--Hb_000926_170 Hb_000172_730--Hb_007040_030 Hb_000002_130--Hb_000926_170 Hb_000002_130--Hb_007040_030 Hb_000002_130--Hb_000896_140 Hb_119789_010 Hb_119789_010 Hb_000002_130--Hb_119789_010 Hb_030469_010--Hb_000002_130 Hb_030469_010--Hb_110048_010 Hb_001511_130 Hb_001511_130 Hb_030469_010--Hb_001511_130 Hb_008978_010 Hb_008978_010 Hb_030469_010--Hb_008978_010 Hb_000926_170--Hb_007040_030 Hb_000926_170--Hb_000896_140 Hb_000926_170--Hb_119789_010 Hb_156055_020 Hb_156055_020 Hb_000926_170--Hb_156055_020 Hb_004899_160 Hb_004899_160 Hb_000926_170--Hb_004899_160 Hb_007040_030--Hb_000896_140 Hb_007040_030--Hb_119789_010 Hb_007040_030--Hb_156055_020 Hb_007040_030--Hb_004899_160 Hb_000896_140--Hb_119789_010 Hb_000896_140--Hb_156055_020 Hb_000896_140--Hb_004899_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.220318 0.0130277 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis