Hb_111147_010

Information

Type -
Description -
Location Contig111147: 240-1897
Sequence    

Annotation

kegg
ID rcu:RCOM_0339140
description hypothetical protein
nr
ID XP_002531996.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T170
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0339140 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111147_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_008705_040 0.1182473279 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
3 Hb_003734_120 0.1232300229 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
4 Hb_039496_010 0.1260214631 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
5 Hb_006618_080 0.1339001574 - - PREDICTED: non-specific lipid-transfer protein [Jatropha curcas]
6 Hb_003805_080 0.1363762722 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
7 Hb_003787_060 0.1366206967 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
8 Hb_000276_030 0.1385250878 - - dimethylaniline monooxygenase, putative [Ricinus communis]
9 Hb_156696_010 0.1409350061 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
10 Hb_004129_110 0.1479620595 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
11 Hb_000300_170 0.1494034119 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
12 Hb_001623_400 0.1501537208 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000022_280 0.1504854376 - - PREDICTED: uncharacterized protein LOC105638282 [Jatropha curcas]
14 Hb_005489_120 0.1525811732 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
15 Hb_002042_200 0.1536740209 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
16 Hb_004452_080 0.1539109265 - - ring finger protein, putative [Ricinus communis]
17 Hb_188923_010 0.1542285027 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
18 Hb_003266_060 0.1554887512 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
19 Hb_001369_620 0.1568561614 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
20 Hb_018133_110 0.1584510007 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_111147_010 Hb_111147_010 Hb_008705_040 Hb_008705_040 Hb_111147_010--Hb_008705_040 Hb_003734_120 Hb_003734_120 Hb_111147_010--Hb_003734_120 Hb_039496_010 Hb_039496_010 Hb_111147_010--Hb_039496_010 Hb_006618_080 Hb_006618_080 Hb_111147_010--Hb_006618_080 Hb_003805_080 Hb_003805_080 Hb_111147_010--Hb_003805_080 Hb_003787_060 Hb_003787_060 Hb_111147_010--Hb_003787_060 Hb_008705_040--Hb_039496_010 Hb_004452_080 Hb_004452_080 Hb_008705_040--Hb_004452_080 Hb_028008_030 Hb_028008_030 Hb_008705_040--Hb_028008_030 Hb_008705_040--Hb_003805_080 Hb_017491_040 Hb_017491_040 Hb_008705_040--Hb_017491_040 Hb_000276_030 Hb_000276_030 Hb_003734_120--Hb_000276_030 Hb_003734_120--Hb_003787_060 Hb_188923_010 Hb_188923_010 Hb_003734_120--Hb_188923_010 Hb_018133_110 Hb_018133_110 Hb_003734_120--Hb_018133_110 Hb_007313_010 Hb_007313_010 Hb_003734_120--Hb_007313_010 Hb_002042_200 Hb_002042_200 Hb_003734_120--Hb_002042_200 Hb_039496_010--Hb_003787_060 Hb_039496_010--Hb_003805_080 Hb_000934_290 Hb_000934_290 Hb_039496_010--Hb_000934_290 Hb_000963_010 Hb_000963_010 Hb_039496_010--Hb_000963_010 Hb_039496_010--Hb_028008_030 Hb_003788_010 Hb_003788_010 Hb_039496_010--Hb_003788_010 Hb_000347_230 Hb_000347_230 Hb_006618_080--Hb_000347_230 Hb_000005_230 Hb_000005_230 Hb_006618_080--Hb_000005_230 Hb_006618_080--Hb_007313_010 Hb_000723_240 Hb_000723_240 Hb_006618_080--Hb_000723_240 Hb_000589_100 Hb_000589_100 Hb_006618_080--Hb_000589_100 Hb_006618_080--Hb_003734_120 Hb_003805_080--Hb_003787_060 Hb_003805_080--Hb_028008_030 Hb_003805_080--Hb_188923_010 Hb_000230_160 Hb_000230_160 Hb_003805_080--Hb_000230_160 Hb_003058_180 Hb_003058_180 Hb_003805_080--Hb_003058_180 Hb_003787_060--Hb_188923_010 Hb_003787_060--Hb_000963_010 Hb_003787_060--Hb_000934_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.521658 0.25251 0.774464 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.052729 1.57887 0.0586877

CAGE analysis