Hb_111198_020

Information

Type -
Description -
Location Contig111198: 25859-31138
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP37467.1
description hypothetical protein JCGZ_06907 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06907 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03450: 30145-30540
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111198_020 0.0 - - hypothetical protein JCGZ_06907 [Jatropha curcas]
2 Hb_000748_080 0.112520778 - - hypothetical protein OsI_28173 [Oryza sativa Indica Group]
3 Hb_004108_140 0.1178541902 - - PREDICTED: HUA2-like protein 3 isoform X3 [Jatropha curcas]
4 Hb_011512_090 0.1195235373 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
5 Hb_089497_010 0.1225857305 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like isoform X3 [Jatropha curcas]
6 Hb_002400_400 0.12572949 - - PREDICTED: topless-related protein 1-like isoform X3 [Jatropha curcas]
7 Hb_001089_020 0.1282437415 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Jatropha curcas]
8 Hb_004218_030 0.1289192709 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005214_090 0.1296484284 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]
10 Hb_004954_070 0.1317489457 - - PREDICTED: uncharacterized protein LOC105645187 [Jatropha curcas]
11 Hb_001178_070 0.1337517177 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
12 Hb_001472_120 0.1358066098 - - -
13 Hb_004429_100 0.1358532198 - - PREDICTED: asparagine synthetase domain-containing protein 1 [Jatropha curcas]
14 Hb_000023_330 0.1361843322 - - RNA recognition motif-containing family protein [Populus trichocarpa]
15 Hb_185679_010 0.1362414379 - - serine/threonine-protein kinase rio2, putative [Ricinus communis]
16 Hb_001514_130 0.138523917 - - hypothetical protein JCGZ_16073 [Jatropha curcas]
17 Hb_000853_350 0.1405421673 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
18 Hb_000343_030 0.1407581598 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
19 Hb_004689_050 0.1422841412 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000317_250 0.1430310317 - - PREDICTED: calcium-dependent protein kinase SK5 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_111198_020 Hb_111198_020 Hb_000748_080 Hb_000748_080 Hb_111198_020--Hb_000748_080 Hb_004108_140 Hb_004108_140 Hb_111198_020--Hb_004108_140 Hb_011512_090 Hb_011512_090 Hb_111198_020--Hb_011512_090 Hb_089497_010 Hb_089497_010 Hb_111198_020--Hb_089497_010 Hb_002400_400 Hb_002400_400 Hb_111198_020--Hb_002400_400 Hb_001089_020 Hb_001089_020 Hb_111198_020--Hb_001089_020 Hb_006157_020 Hb_006157_020 Hb_000748_080--Hb_006157_020 Hb_007017_090 Hb_007017_090 Hb_000748_080--Hb_007017_090 Hb_000086_380 Hb_000086_380 Hb_000748_080--Hb_000086_380 Hb_012490_030 Hb_012490_030 Hb_000748_080--Hb_012490_030 Hb_001579_320 Hb_001579_320 Hb_000748_080--Hb_001579_320 Hb_026099_010 Hb_026099_010 Hb_004108_140--Hb_026099_010 Hb_185679_010 Hb_185679_010 Hb_004108_140--Hb_185679_010 Hb_003994_240 Hb_003994_240 Hb_004108_140--Hb_003994_240 Hb_001936_020 Hb_001936_020 Hb_004108_140--Hb_001936_020 Hb_003935_030 Hb_003935_030 Hb_004108_140--Hb_003935_030 Hb_004370_030 Hb_004370_030 Hb_004108_140--Hb_004370_030 Hb_000976_040 Hb_000976_040 Hb_011512_090--Hb_000976_040 Hb_002110_030 Hb_002110_030 Hb_011512_090--Hb_002110_030 Hb_011512_090--Hb_002400_400 Hb_000200_280 Hb_000200_280 Hb_011512_090--Hb_000200_280 Hb_002005_090 Hb_002005_090 Hb_011512_090--Hb_002005_090 Hb_001621_130 Hb_001621_130 Hb_011512_090--Hb_001621_130 Hb_112023_010 Hb_112023_010 Hb_089497_010--Hb_112023_010 Hb_089497_010--Hb_002400_400 Hb_004136_040 Hb_004136_040 Hb_089497_010--Hb_004136_040 Hb_166236_010 Hb_166236_010 Hb_089497_010--Hb_166236_010 Hb_004355_030 Hb_004355_030 Hb_089497_010--Hb_004355_030 Hb_002007_240 Hb_002007_240 Hb_002400_400--Hb_002007_240 Hb_000244_220 Hb_000244_220 Hb_002400_400--Hb_000244_220 Hb_005214_090 Hb_005214_090 Hb_002400_400--Hb_005214_090 Hb_002400_400--Hb_000200_280 Hb_002400_400--Hb_000976_040 Hb_000010_250 Hb_000010_250 Hb_001089_020--Hb_000010_250 Hb_004453_040 Hb_004453_040 Hb_001089_020--Hb_004453_040 Hb_005271_190 Hb_005271_190 Hb_001089_020--Hb_005271_190 Hb_002918_060 Hb_002918_060 Hb_001089_020--Hb_002918_060 Hb_001089_020--Hb_011512_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.74263 4.53266 1.38072 1.5252 5.97936 5.84058
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.94442 3.18407 1.43726 7.63602 2.18063

CAGE analysis