Hb_111332_010

Information

Type -
Description -
Location Contig111332: 1038-1190
Sequence    

Annotation

kegg
ID pop:POPTR_0016s06750g
description POPTRDRAFT_825166; dihydroneopterin aldolase family protein
nr
ID XP_010106972.1
description Dihydroneopterin aldolase [Morus notabilis]
swissprot
ID Q9SF23
description Dihydroneopterin aldolase 1 OS=Arabidopsis thaliana GN=FOLB1 PE=1 SV=1
trembl
ID W9RVJ2
description Dihydroneopterin aldolase OS=Morus notabilis GN=L484_016900 PE=4 SV=1
Gene Ontology
ID GO:0004150
description dihydroneopterin aldolase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111332_010 0.0 - - Dihydroneopterin aldolase [Morus notabilis]
2 Hb_105480_010 0.0137808753 - - -
3 Hb_128173_010 0.0263576882 - - PREDICTED: uncharacterized protein LOC104219073 [Nicotiana sylvestris]
4 Hb_007761_010 0.0290799443 - - -
5 Hb_005542_020 0.0375235871 - - lupus la ribonucleoprotein, putative [Ricinus communis]
6 Hb_013727_010 0.0829138408 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
7 Hb_006692_050 0.1112468218 - - Chloroplastic lipocalin [Theobroma cacao]
8 Hb_009268_110 0.1312074148 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
9 Hb_089491_010 0.1330964551 - - -
10 Hb_000795_010 0.1497492072 - - -
11 Hb_042026_010 0.1709463138 - - RNA binding protein, putative [Ricinus communis]
12 Hb_136856_010 0.1720839019 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
13 Hb_076583_010 0.1809590379 - - hypothetical protein JCGZ_17827 [Jatropha curcas]
14 Hb_003636_050 0.183430147 - - PREDICTED: bark storage protein A-like [Populus euphratica]
15 Hb_021068_020 0.189748974 - - -
16 Hb_000004_140 0.1932000634 - - -
17 Hb_012340_040 0.2057238548 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Populus euphratica]
18 Hb_004829_020 0.2068805571 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_009066_010 0.2101753408 - - -
20 Hb_068347_020 0.2151567682 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_111332_010 Hb_111332_010 Hb_105480_010 Hb_105480_010 Hb_111332_010--Hb_105480_010 Hb_128173_010 Hb_128173_010 Hb_111332_010--Hb_128173_010 Hb_007761_010 Hb_007761_010 Hb_111332_010--Hb_007761_010 Hb_005542_020 Hb_005542_020 Hb_111332_010--Hb_005542_020 Hb_013727_010 Hb_013727_010 Hb_111332_010--Hb_013727_010 Hb_006692_050 Hb_006692_050 Hb_111332_010--Hb_006692_050 Hb_105480_010--Hb_005542_020 Hb_105480_010--Hb_128173_010 Hb_105480_010--Hb_007761_010 Hb_105480_010--Hb_013727_010 Hb_009268_110 Hb_009268_110 Hb_105480_010--Hb_009268_110 Hb_128173_010--Hb_007761_010 Hb_128173_010--Hb_005542_020 Hb_128173_010--Hb_006692_050 Hb_128173_010--Hb_013727_010 Hb_007761_010--Hb_005542_020 Hb_007761_010--Hb_006692_050 Hb_007761_010--Hb_013727_010 Hb_005542_020--Hb_013727_010 Hb_005542_020--Hb_009268_110 Hb_013727_010--Hb_009268_110 Hb_089491_010 Hb_089491_010 Hb_013727_010--Hb_089491_010 Hb_136856_010 Hb_136856_010 Hb_013727_010--Hb_136856_010 Hb_042026_010 Hb_042026_010 Hb_006692_050--Hb_042026_010 Hb_000795_010 Hb_000795_010 Hb_006692_050--Hb_000795_010 Hb_006692_050--Hb_105480_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 13.9506 82.0491
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis