Hb_111347_010

Information

Type -
Description -
Location Contig111347: 1-672
Sequence    

Annotation

kegg
ID bvg:104893434
description uncharacterized LOC104893434
nr
ID XP_012461546.1
description PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID M1DSU3
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400043417 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111347_010 0.0 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
2 Hb_000077_240 0.1701760374 - - hypothetical protein PHAVU_011G114500g, partial [Phaseolus vulgaris]
3 Hb_003398_030 0.1784972763 - - PREDICTED: uncharacterized protein LOC104583892 [Brachypodium distachyon]
4 Hb_003158_020 0.2017878746 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
5 Hb_001022_040 0.2468356208 - - PREDICTED: uncharacterized protein LOC105634753 [Jatropha curcas]
6 Hb_128051_010 0.2660860339 - - -
7 Hb_000853_130 0.2859533457 - - PREDICTED: probable ATP-dependent RNA helicase DHX37 [Jatropha curcas]
8 Hb_001140_240 0.2992497406 - - metal ion binding protein, putative [Ricinus communis]
9 Hb_000804_030 0.3053412458 - - Protein C14orf111, putative [Ricinus communis]
10 Hb_008954_010 0.3076069434 - - -
11 Hb_109268_010 0.3095321519 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
12 Hb_001369_260 0.3156545923 - - aldo-keto reductase, putative [Ricinus communis]
13 Hb_001348_110 0.3162174427 - - PREDICTED: esterase-like [Jatropha curcas]
14 Hb_170207_010 0.3176803579 - - hypothetical protein JCGZ_01992 [Jatropha curcas]
15 Hb_021888_120 0.3190472037 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
16 Hb_006907_120 0.3201393316 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
17 Hb_006816_400 0.3239848828 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
18 Hb_007451_060 0.3246248976 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
19 Hb_009954_050 0.3279118335 - - PREDICTED: uncharacterized protein LOC104611877 isoform X2 [Nelumbo nucifera]
20 Hb_007951_130 0.328578742 desease resistance Gene Name: UBN2_3 JHL25H03.6 [Jatropha curcas]

Gene co-expression network

sample Hb_111347_010 Hb_111347_010 Hb_000077_240 Hb_000077_240 Hb_111347_010--Hb_000077_240 Hb_003398_030 Hb_003398_030 Hb_111347_010--Hb_003398_030 Hb_003158_020 Hb_003158_020 Hb_111347_010--Hb_003158_020 Hb_001022_040 Hb_001022_040 Hb_111347_010--Hb_001022_040 Hb_128051_010 Hb_128051_010 Hb_111347_010--Hb_128051_010 Hb_000853_130 Hb_000853_130 Hb_111347_010--Hb_000853_130 Hb_000077_240--Hb_003398_030 Hb_006907_120 Hb_006907_120 Hb_000077_240--Hb_006907_120 Hb_000077_240--Hb_128051_010 Hb_109268_010 Hb_109268_010 Hb_000077_240--Hb_109268_010 Hb_007105_010 Hb_007105_010 Hb_000077_240--Hb_007105_010 Hb_003398_030--Hb_006907_120 Hb_008289_050 Hb_008289_050 Hb_003398_030--Hb_008289_050 Hb_003398_030--Hb_128051_010 Hb_003398_030--Hb_007105_010 Hb_001369_260 Hb_001369_260 Hb_003158_020--Hb_001369_260 Hb_001998_060 Hb_001998_060 Hb_003158_020--Hb_001998_060 Hb_039112_010 Hb_039112_010 Hb_003158_020--Hb_039112_010 Hb_000869_110 Hb_000869_110 Hb_003158_020--Hb_000869_110 Hb_002392_050 Hb_002392_050 Hb_003158_020--Hb_002392_050 Hb_006816_400 Hb_006816_400 Hb_001022_040--Hb_006816_400 Hb_000025_440 Hb_000025_440 Hb_001022_040--Hb_000025_440 Hb_004241_010 Hb_004241_010 Hb_001022_040--Hb_004241_010 Hb_000414_150 Hb_000414_150 Hb_001022_040--Hb_000414_150 Hb_007951_130 Hb_007951_130 Hb_001022_040--Hb_007951_130 Hb_128051_010--Hb_109268_010 Hb_001022_060 Hb_001022_060 Hb_128051_010--Hb_001022_060 Hb_003209_050 Hb_003209_050 Hb_128051_010--Hb_003209_050 Hb_139138_010 Hb_139138_010 Hb_128051_010--Hb_139138_010 Hb_002903_010 Hb_002903_010 Hb_000853_130--Hb_002903_010 Hb_000504_010 Hb_000504_010 Hb_000853_130--Hb_000504_010 Hb_005725_110 Hb_005725_110 Hb_000853_130--Hb_005725_110 Hb_001085_180 Hb_001085_180 Hb_000853_130--Hb_001085_180 Hb_005408_040 Hb_005408_040 Hb_000853_130--Hb_005408_040 Hb_000012_070 Hb_000012_070 Hb_000853_130--Hb_000012_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0625158 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0856742 0.202041 0 0.0274528 0

CAGE analysis