Hb_112064_020

Information

Type -
Description -
Location Contig112064: 15541-17510
Sequence    

Annotation

kegg
ID pop:POPTR_0016s01210g
description POPTRDRAFT_824970; hypothetical protein
nr
ID XP_012078077.1
description PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
swissprot
ID Q9FGK4
description Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis thaliana GN=At5g47530 PE=2 SV=1
trembl
ID A0A067KKV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13691 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cytochrome b561 and domon domain-containing protein at5g47530-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112064_020 0.0 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
2 Hb_006570_070 0.1647977346 - - cyclophilin [Hevea brasiliensis]
3 Hb_003207_110 0.1680721817 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A synthase hydroxymethylglutaryl coenzyme A synthase [Hevea brasiliensis]
4 Hb_000920_150 0.1824860165 - - annexin [Manihot esculenta]
5 Hb_006501_110 0.19227635 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X1 [Jatropha curcas]
6 Hb_002603_130 0.1980411707 - - PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
7 Hb_000907_090 0.2075434486 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
8 Hb_001035_040 0.2114141751 - - unnamed protein product [Coffea canephora]
9 Hb_002471_070 0.2116172391 - - Tartrate-resistant acid phosphatase type 5 precursor, putative [Ricinus communis]
10 Hb_004787_090 0.2116842984 - - PREDICTED: HVA22-like protein a [Jatropha curcas]
11 Hb_000700_130 0.2127676519 - - PREDICTED: uncharacterized protein At4g13200, chloroplastic [Jatropha curcas]
12 Hb_001373_150 0.2128645801 - - PREDICTED: uncharacterized protein LOC105628778 [Jatropha curcas]
13 Hb_001136_110 0.2142183206 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38) isoform X1 [Jatropha curcas]
14 Hb_004738_010 0.2164812091 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
15 Hb_002735_060 0.2171988839 - - PREDICTED: desumoylating isopeptidase 1 [Jatropha curcas]
16 Hb_030565_130 0.2186553554 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
17 Hb_009493_010 0.2287757032 - - Minor allergen Alt a, putative [Ricinus communis]
18 Hb_074197_010 0.2294402883 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
19 Hb_001741_090 0.2298157131 rubber biosynthesis Gene Name: SRPP1 RecName: Full=Small rubber particle protein; Short=SRPP; AltName: Full=22 kDa rubber particle protein; Short=22 kDa RPP; AltName: Full=27 kDa natural rubber allergen; AltName: Full=Latex allergen Hev b 3; AltName: Allergen=Hev b 3 [Hevea brasiliensis]
20 Hb_004994_260 0.229901336 - - Remorin, putative [Ricinus communis]

Gene co-expression network

sample Hb_112064_020 Hb_112064_020 Hb_006570_070 Hb_006570_070 Hb_112064_020--Hb_006570_070 Hb_003207_110 Hb_003207_110 Hb_112064_020--Hb_003207_110 Hb_000920_150 Hb_000920_150 Hb_112064_020--Hb_000920_150 Hb_006501_110 Hb_006501_110 Hb_112064_020--Hb_006501_110 Hb_002603_130 Hb_002603_130 Hb_112064_020--Hb_002603_130 Hb_000907_090 Hb_000907_090 Hb_112064_020--Hb_000907_090 Hb_030565_130 Hb_030565_130 Hb_006570_070--Hb_030565_130 Hb_001153_150 Hb_001153_150 Hb_006570_070--Hb_001153_150 Hb_000914_170 Hb_000914_170 Hb_006570_070--Hb_000914_170 Hb_001373_150 Hb_001373_150 Hb_006570_070--Hb_001373_150 Hb_002473_110 Hb_002473_110 Hb_006570_070--Hb_002473_110 Hb_002471_070 Hb_002471_070 Hb_003207_110--Hb_002471_070 Hb_003207_110--Hb_000920_150 Hb_005396_040 Hb_005396_040 Hb_003207_110--Hb_005396_040 Hb_023214_010 Hb_023214_010 Hb_003207_110--Hb_023214_010 Hb_002876_030 Hb_002876_030 Hb_003207_110--Hb_002876_030 Hb_001035_040 Hb_001035_040 Hb_003207_110--Hb_001035_040 Hb_000920_150--Hb_001035_040 Hb_148121_010 Hb_148121_010 Hb_000920_150--Hb_148121_010 Hb_000920_150--Hb_023214_010 Hb_000920_150--Hb_002471_070 Hb_001741_090 Hb_001741_090 Hb_000920_150--Hb_001741_090 Hb_000481_020 Hb_000481_020 Hb_006501_110--Hb_000481_020 Hb_004787_090 Hb_004787_090 Hb_006501_110--Hb_004787_090 Hb_000982_070 Hb_000982_070 Hb_006501_110--Hb_000982_070 Hb_000390_200 Hb_000390_200 Hb_006501_110--Hb_000390_200 Hb_004659_120 Hb_004659_120 Hb_006501_110--Hb_004659_120 Hb_000723_090 Hb_000723_090 Hb_006501_110--Hb_000723_090 Hb_000032_240 Hb_000032_240 Hb_002603_130--Hb_000032_240 Hb_002603_130--Hb_006501_110 Hb_002603_130--Hb_000982_070 Hb_074197_010 Hb_074197_010 Hb_002603_130--Hb_074197_010 Hb_000207_380 Hb_000207_380 Hb_002603_130--Hb_000207_380 Hb_000139_330 Hb_000139_330 Hb_002603_130--Hb_000139_330 Hb_004994_260 Hb_004994_260 Hb_000907_090--Hb_004994_260 Hb_002214_050 Hb_002214_050 Hb_000907_090--Hb_002214_050 Hb_004738_010 Hb_004738_010 Hb_000907_090--Hb_004738_010 Hb_162275_030 Hb_162275_030 Hb_000907_090--Hb_162275_030 Hb_010344_040 Hb_010344_040 Hb_000907_090--Hb_010344_040 Hb_002735_060 Hb_002735_060 Hb_000907_090--Hb_002735_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.797237 0.222031 0.0446214 0.830788 0.504211 0.641251
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.13145 0.515912 1.11284 0.133935 0.215472

CAGE analysis