Hb_112145_010

Information

Type -
Description -
Location Contig112145: 230-1554
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID XP_002529764.1
description kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SUU5
description Kinase, putative OS=Ricinus communis GN=RCOM_0574920 PE=3 SV=1
Gene Ontology
ID GO:0030247
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112145_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_002170_010 0.0723326009 - - hypothetical protein JCGZ_25046 [Jatropha curcas]
3 Hb_128216_010 0.0757826735 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
4 Hb_002303_050 0.0933180462 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor PTL-like [Populus euphratica]
5 Hb_155015_020 0.0944182889 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
6 Hb_006951_010 0.0944620922 - - PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Populus euphratica]
7 Hb_002811_320 0.1001581711 - - cation-transporting atpase plant, putative [Ricinus communis]
8 Hb_000201_070 0.1006498701 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
9 Hb_005946_200 0.1028054984 - - hypothetical protein POPTR_0006s16210g [Populus trichocarpa]
10 Hb_010267_030 0.1039711896 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
11 Hb_004474_070 0.1056066714 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
12 Hb_005618_010 0.1082624621 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
13 Hb_002804_070 0.1151425202 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
14 Hb_001953_010 0.1298456428 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
15 Hb_002186_030 0.1303552099 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1 [Populus euphratica]
16 Hb_000230_550 0.1315566378 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
17 Hb_000172_070 0.1359311575 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
18 Hb_005048_090 0.1362230922 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
19 Hb_001022_070 0.1412569775 - - cell wall invertase [Manihot esculenta]
20 Hb_004374_170 0.1412809023 - - PREDICTED: gibberellin 20 oxidase 1-B [Jatropha curcas]

Gene co-expression network

sample Hb_112145_010 Hb_112145_010 Hb_002170_010 Hb_002170_010 Hb_112145_010--Hb_002170_010 Hb_128216_010 Hb_128216_010 Hb_112145_010--Hb_128216_010 Hb_002303_050 Hb_002303_050 Hb_112145_010--Hb_002303_050 Hb_155015_020 Hb_155015_020 Hb_112145_010--Hb_155015_020 Hb_006951_010 Hb_006951_010 Hb_112145_010--Hb_006951_010 Hb_002811_320 Hb_002811_320 Hb_112145_010--Hb_002811_320 Hb_002170_010--Hb_128216_010 Hb_005048_090 Hb_005048_090 Hb_002170_010--Hb_005048_090 Hb_010267_030 Hb_010267_030 Hb_002170_010--Hb_010267_030 Hb_002170_010--Hb_006951_010 Hb_002534_070 Hb_002534_070 Hb_002170_010--Hb_002534_070 Hb_004474_070 Hb_004474_070 Hb_128216_010--Hb_004474_070 Hb_128216_010--Hb_002303_050 Hb_001953_010 Hb_001953_010 Hb_128216_010--Hb_001953_010 Hb_002804_070 Hb_002804_070 Hb_128216_010--Hb_002804_070 Hb_002303_050--Hb_004474_070 Hb_002303_050--Hb_001953_010 Hb_005946_200 Hb_005946_200 Hb_002303_050--Hb_005946_200 Hb_001675_350 Hb_001675_350 Hb_002303_050--Hb_001675_350 Hb_002303_050--Hb_002804_070 Hb_155015_020--Hb_002811_320 Hb_001198_170 Hb_001198_170 Hb_155015_020--Hb_001198_170 Hb_001257_120 Hb_001257_120 Hb_155015_020--Hb_001257_120 Hb_172240_010 Hb_172240_010 Hb_155015_020--Hb_172240_010 Hb_000201_070 Hb_000201_070 Hb_155015_020--Hb_000201_070 Hb_002186_030 Hb_002186_030 Hb_006951_010--Hb_002186_030 Hb_006951_010--Hb_000201_070 Hb_004374_170 Hb_004374_170 Hb_006951_010--Hb_004374_170 Hb_006951_010--Hb_002804_070 Hb_002811_320--Hb_001198_170 Hb_002811_320--Hb_001257_120 Hb_002811_320--Hb_005946_200 Hb_004241_100 Hb_004241_100 Hb_002811_320--Hb_004241_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.293985 0.111977 0.408064 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0895149

CAGE analysis