Hb_112703_010

Information

Type -
Description -
Location Contig112703: 1-1669
Sequence    

Annotation

kegg
ID pmum:103325808
description cytochrome P450 CYP72A219-like
nr
ID XP_008226210.1
description PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
swissprot
ID H2DH21
description Cytochrome P450 CYP72A219 OS=Panax ginseng PE=2 SV=1
trembl
ID M5WPE9
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004271mg PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp72a219-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03863: 120-673
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112703_010 0.0 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
2 Hb_002289_180 0.0555435996 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
3 Hb_179363_010 0.0613917707 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_008651_010 0.0699599832 - - cytochrome P450, putative [Ricinus communis]
5 Hb_032071_010 0.0799680228 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
6 Hb_000997_130 0.1047939249 - - DNA binding protein, putative [Ricinus communis]
7 Hb_000164_160 0.1092708233 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
8 Hb_099188_010 0.1117124348 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_000836_180 0.1127470611 - - ferric reductase oxidase [Manihot esculenta]
10 Hb_000433_050 0.1172948975 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
11 Hb_008725_220 0.1212073134 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
12 Hb_003207_230 0.1219120545 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
13 Hb_005054_330 0.1236319704 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
14 Hb_001515_040 0.1241309488 - - -
15 Hb_004899_010 0.1248602574 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
16 Hb_010223_010 0.1249592195 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
17 Hb_008637_020 0.1273007907 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000819_020 0.1310301629 - - hypothetical protein PRUPE_ppa020290mg, partial [Prunus persica]
19 Hb_000025_490 0.1323321614 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
20 Hb_167186_010 0.133218919 - - cation-transporting atpase plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_112703_010 Hb_112703_010 Hb_002289_180 Hb_002289_180 Hb_112703_010--Hb_002289_180 Hb_179363_010 Hb_179363_010 Hb_112703_010--Hb_179363_010 Hb_008651_010 Hb_008651_010 Hb_112703_010--Hb_008651_010 Hb_032071_010 Hb_032071_010 Hb_112703_010--Hb_032071_010 Hb_000997_130 Hb_000997_130 Hb_112703_010--Hb_000997_130 Hb_000164_160 Hb_000164_160 Hb_112703_010--Hb_000164_160 Hb_002289_180--Hb_000997_130 Hb_002289_180--Hb_032071_010 Hb_002289_180--Hb_008651_010 Hb_099188_010 Hb_099188_010 Hb_002289_180--Hb_099188_010 Hb_008637_020 Hb_008637_020 Hb_002289_180--Hb_008637_020 Hb_179363_010--Hb_008651_010 Hb_000433_050 Hb_000433_050 Hb_179363_010--Hb_000433_050 Hb_179363_010--Hb_032071_010 Hb_179363_010--Hb_002289_180 Hb_001515_040 Hb_001515_040 Hb_179363_010--Hb_001515_040 Hb_008651_010--Hb_032071_010 Hb_010223_010 Hb_010223_010 Hb_008651_010--Hb_010223_010 Hb_008651_010--Hb_000433_050 Hb_001846_030 Hb_001846_030 Hb_032071_010--Hb_001846_030 Hb_032071_010--Hb_000997_130 Hb_046610_010 Hb_046610_010 Hb_000997_130--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_000997_130--Hb_164577_010 Hb_007546_010 Hb_007546_010 Hb_000997_130--Hb_007546_010 Hb_000997_130--Hb_000164_160 Hb_000997_130--Hb_010223_010 Hb_005054_330 Hb_005054_330 Hb_000164_160--Hb_005054_330 Hb_002542_030 Hb_002542_030 Hb_000164_160--Hb_002542_030 Hb_004899_010 Hb_004899_010 Hb_000164_160--Hb_004899_010 Hb_000164_160--Hb_002289_180 Hb_000627_130 Hb_000627_130 Hb_000164_160--Hb_000627_130 Hb_000164_160--Hb_008637_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.97828 4.43523 1.03226 0 0.0195386
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis