Hb_113250_010

Information

Type -
Description -
Location Contig113250: 66-661
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113250_010 0.0 - - -
2 Hb_000758_040 0.2488620338 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
3 Hb_012754_040 0.2702219414 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
4 Hb_000816_120 0.271264971 - - PREDICTED: uncharacterized protein LOC105649214 [Jatropha curcas]
5 Hb_000645_110 0.3105670391 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
6 Hb_001190_060 0.3214635584 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 1 protein [Jatropha curcas]
7 Hb_003636_070 0.3265441755 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002233_040 0.329208331 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
9 Hb_000011_430 0.3305491324 - - zinc finger protein, putative [Ricinus communis]
10 Hb_004162_240 0.3396300611 transcription factor TF Family: C2H2 C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao]
11 Hb_003788_060 0.3403075319 - - PREDICTED: protein MKS1-like [Populus euphratica]
12 Hb_003073_180 0.3472848602 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
13 Hb_003038_170 0.3497096947 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003096_050 0.353119247 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000209_110 0.3550206654 - - PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
16 Hb_094437_060 0.3588570234 - - PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
17 Hb_001959_300 0.3593769522 - - PREDICTED: 3-isopropylmalate dehydratase large subunit [Jatropha curcas]
18 Hb_000975_150 0.3594716866 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
19 Hb_000805_320 0.362067614 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
20 Hb_080147_100 0.3636917926 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN [Jatropha curcas]

Gene co-expression network

sample Hb_113250_010 Hb_113250_010 Hb_000758_040 Hb_000758_040 Hb_113250_010--Hb_000758_040 Hb_012754_040 Hb_012754_040 Hb_113250_010--Hb_012754_040 Hb_000816_120 Hb_000816_120 Hb_113250_010--Hb_000816_120 Hb_000645_110 Hb_000645_110 Hb_113250_010--Hb_000645_110 Hb_001190_060 Hb_001190_060 Hb_113250_010--Hb_001190_060 Hb_003636_070 Hb_003636_070 Hb_113250_010--Hb_003636_070 Hb_000758_040--Hb_000816_120 Hb_000758_040--Hb_001190_060 Hb_000011_430 Hb_000011_430 Hb_000758_040--Hb_000011_430 Hb_003096_050 Hb_003096_050 Hb_000758_040--Hb_003096_050 Hb_000975_150 Hb_000975_150 Hb_000758_040--Hb_000975_150 Hb_001587_010 Hb_001587_010 Hb_012754_040--Hb_001587_010 Hb_012754_040--Hb_000645_110 Hb_012807_010 Hb_012807_010 Hb_012754_040--Hb_012807_010 Hb_003160_020 Hb_003160_020 Hb_012754_040--Hb_003160_020 Hb_005273_040 Hb_005273_040 Hb_012754_040--Hb_005273_040 Hb_000816_120--Hb_001190_060 Hb_000816_120--Hb_003096_050 Hb_000056_330 Hb_000056_330 Hb_000816_120--Hb_000056_330 Hb_000213_130 Hb_000213_130 Hb_000816_120--Hb_000213_130 Hb_010647_010 Hb_010647_010 Hb_000816_120--Hb_010647_010 Hb_003073_180 Hb_003073_180 Hb_000645_110--Hb_003073_180 Hb_080147_100 Hb_080147_100 Hb_000645_110--Hb_080147_100 Hb_140049_050 Hb_140049_050 Hb_000645_110--Hb_140049_050 Hb_000209_110 Hb_000209_110 Hb_000645_110--Hb_000209_110 Hb_000317_360 Hb_000317_360 Hb_000645_110--Hb_000317_360 Hb_000157_130 Hb_000157_130 Hb_000645_110--Hb_000157_130 Hb_001190_060--Hb_003096_050 Hb_001190_060--Hb_000056_330 Hb_003992_250 Hb_003992_250 Hb_001190_060--Hb_003992_250 Hb_000140_160 Hb_000140_160 Hb_001190_060--Hb_000140_160 Hb_002311_240 Hb_002311_240 Hb_001190_060--Hb_002311_240 Hb_003636_070--Hb_000975_150 Hb_003636_070--Hb_003096_050 Hb_003636_070--Hb_010647_010 Hb_007520_040 Hb_007520_040 Hb_003636_070--Hb_007520_040 Hb_000445_450 Hb_000445_450 Hb_003636_070--Hb_000445_450 Hb_003636_070--Hb_002311_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.058443 0 0 0 0.0589458 0.0525017
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.136911 0.107556 0 0.626697 0

CAGE analysis