Hb_113388_010

Information

Type -
Description -
Location Contig113388: 65-298
Sequence    

Annotation

kegg
ID rcu:RCOM_0544680
description hypothetical protein
nr
ID XP_002529421.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9STV2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0544680 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113388_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_089032_060 0.0788325146 - - Uncharacterized protein TCM_027342 [Theobroma cacao]
3 Hb_032299_030 0.1034803625 transcription factor TF Family: MYB PREDICTED: transcription factor MYB59 isoform X1 [Jatropha curcas]
4 Hb_000380_070 0.1122743379 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007292_030 0.1274250183 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004352_020 0.1679866022 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_003849_230 0.1705327399 - - PREDICTED: NEP1-interacting protein 2-like [Jatropha curcas]
8 Hb_172864_010 0.1711109421 - - PREDICTED: 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase-like [Jatropha curcas]
9 Hb_000575_130 0.1712220141 - - PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Populus euphratica]
10 Hb_000563_450 0.1735953936 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
11 Hb_000395_160 0.1962130462 - - hypothetical protein POPTR_0006s25490g [Populus trichocarpa]
12 Hb_000004_150 0.2049738162 - - hypothetical protein RCOM_1382630 [Ricinus communis]
13 Hb_000007_170 0.2049738162 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]
14 Hb_000010_280 0.2049738162 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
15 Hb_000022_220 0.2049738162 - - PREDICTED: potassium channel KAT3 [Jatropha curcas]
16 Hb_000045_120 0.2049738162 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
17 Hb_000056_320 0.2049738162 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
18 Hb_000066_110 0.2049738162 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01370 [Jatropha curcas]
19 Hb_000072_270 0.2049738162 - - JHL22C18.10 [Jatropha curcas]
20 Hb_000078_110 0.2049738162 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]

Gene co-expression network

sample Hb_113388_010 Hb_113388_010 Hb_089032_060 Hb_089032_060 Hb_113388_010--Hb_089032_060 Hb_032299_030 Hb_032299_030 Hb_113388_010--Hb_032299_030 Hb_000380_070 Hb_000380_070 Hb_113388_010--Hb_000380_070 Hb_007292_030 Hb_007292_030 Hb_113388_010--Hb_007292_030 Hb_004352_020 Hb_004352_020 Hb_113388_010--Hb_004352_020 Hb_003849_230 Hb_003849_230 Hb_113388_010--Hb_003849_230 Hb_089032_060--Hb_032299_030 Hb_089032_060--Hb_000380_070 Hb_000395_160 Hb_000395_160 Hb_089032_060--Hb_000395_160 Hb_000004_150 Hb_000004_150 Hb_089032_060--Hb_000004_150 Hb_000007_170 Hb_000007_170 Hb_089032_060--Hb_000007_170 Hb_032299_030--Hb_000395_160 Hb_032299_030--Hb_000380_070 Hb_032299_030--Hb_000004_150 Hb_032299_030--Hb_000007_170 Hb_000380_070--Hb_004352_020 Hb_172864_010 Hb_172864_010 Hb_000380_070--Hb_172864_010 Hb_000380_070--Hb_000395_160 Hb_007292_030--Hb_003849_230 Hb_000575_130 Hb_000575_130 Hb_007292_030--Hb_000575_130 Hb_000563_450 Hb_000563_450 Hb_007292_030--Hb_000563_450 Hb_000486_050 Hb_000486_050 Hb_007292_030--Hb_000486_050 Hb_007292_030--Hb_000380_070 Hb_004352_020--Hb_172864_010 Hb_004352_020--Hb_089032_060 Hb_004352_020--Hb_032299_030 Hb_005687_020 Hb_005687_020 Hb_004352_020--Hb_005687_020 Hb_004352_020--Hb_000395_160 Hb_003849_230--Hb_000575_130 Hb_003849_230--Hb_000563_450 Hb_003849_230--Hb_000486_050 Hb_001854_010 Hb_001854_010 Hb_003849_230--Hb_001854_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 45.5924 0 0 0 4.04703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis