Hb_113635_010

Information

Type -
Description -
Location Contig113635: 2937-4099
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113635_010 0.0 - - -
2 Hb_023051_020 0.1454342941 - - -
3 Hb_002290_050 0.1568747757 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001186_070 0.1570495708 - - PREDICTED: F-box protein FBW2-like [Gossypium raimondii]
5 Hb_001373_100 0.1921034985 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000329_660 0.1936707215 - - PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic [Jatropha curcas]
7 Hb_002326_170 0.1940280084 - - Protein Z, putative [Ricinus communis]
8 Hb_001143_070 0.1951009841 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
9 Hb_002989_040 0.1993897527 - - hypothetical protein 1 [Hevea brasiliensis]
10 Hb_001425_110 0.2025474348 - - hypothetical protein Csa_6G106200 [Cucumis sativus]
11 Hb_003226_240 0.2031416238 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
12 Hb_039946_010 0.2047484398 - - hypothetical protein POPTR_0018s09200g [Populus trichocarpa]
13 Hb_001425_070 0.2065844224 - - -
14 Hb_004461_020 0.2070043592 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
15 Hb_001922_080 0.2080326822 - - Tellurite resistance protein tehA, putative [Ricinus communis]
16 Hb_034482_040 0.2095316048 - - aspartate kinase, partial [Francisella tularensis]
17 Hb_001842_080 0.2119637393 - - -
18 Hb_159352_010 0.2121673137 - - hypothetical protein JCGZ_12393 [Jatropha curcas]
19 Hb_001433_100 0.2138761122 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
20 Hb_000387_060 0.2151855656 - - -

Gene co-expression network

sample Hb_113635_010 Hb_113635_010 Hb_023051_020 Hb_023051_020 Hb_113635_010--Hb_023051_020 Hb_002290_050 Hb_002290_050 Hb_113635_010--Hb_002290_050 Hb_001186_070 Hb_001186_070 Hb_113635_010--Hb_001186_070 Hb_001373_100 Hb_001373_100 Hb_113635_010--Hb_001373_100 Hb_000329_660 Hb_000329_660 Hb_113635_010--Hb_000329_660 Hb_002326_170 Hb_002326_170 Hb_113635_010--Hb_002326_170 Hb_002989_040 Hb_002989_040 Hb_023051_020--Hb_002989_040 Hb_003226_240 Hb_003226_240 Hb_023051_020--Hb_003226_240 Hb_034482_040 Hb_034482_040 Hb_023051_020--Hb_034482_040 Hb_001425_070 Hb_001425_070 Hb_023051_020--Hb_001425_070 Hb_091433_030 Hb_091433_030 Hb_023051_020--Hb_091433_030 Hb_012586_020 Hb_012586_020 Hb_002290_050--Hb_012586_020 Hb_001143_070 Hb_001143_070 Hb_002290_050--Hb_001143_070 Hb_002290_050--Hb_001186_070 Hb_039946_010 Hb_039946_010 Hb_002290_050--Hb_039946_010 Hb_004942_020 Hb_004942_020 Hb_002290_050--Hb_004942_020 Hb_001922_080 Hb_001922_080 Hb_001186_070--Hb_001922_080 Hb_001433_100 Hb_001433_100 Hb_001186_070--Hb_001433_100 Hb_001186_070--Hb_000329_660 Hb_001842_080 Hb_001842_080 Hb_001186_070--Hb_001842_080 Hb_001373_100--Hb_000329_660 Hb_001373_100--Hb_003226_240 Hb_001373_100--Hb_001842_080 Hb_000613_160 Hb_000613_160 Hb_001373_100--Hb_000613_160 Hb_003095_070 Hb_003095_070 Hb_001373_100--Hb_003095_070 Hb_012022_100 Hb_012022_100 Hb_001373_100--Hb_012022_100 Hb_003211_050 Hb_003211_050 Hb_000329_660--Hb_003211_050 Hb_000387_060 Hb_000387_060 Hb_000329_660--Hb_000387_060 Hb_000300_210 Hb_000300_210 Hb_000329_660--Hb_000300_210 Hb_000329_660--Hb_003226_240 Hb_001276_060 Hb_001276_060 Hb_000329_660--Hb_001276_060 Hb_002045_200 Hb_002045_200 Hb_002326_170--Hb_002045_200 Hb_001425_050 Hb_001425_050 Hb_002326_170--Hb_001425_050 Hb_002326_170--Hb_001276_060 Hb_008864_060 Hb_008864_060 Hb_002326_170--Hb_008864_060 Hb_002326_170--Hb_001425_070 Hb_001902_120 Hb_001902_120 Hb_002326_170--Hb_001902_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0418735 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.194244 0.381667 0.134014 0 0

CAGE analysis