Hb_113945_010

Information

Type -
Description -
Location Contig113945: 2991-4367
Sequence    

Annotation

kegg
ID rcu:RCOM_0091750
description Receptor protein kinase CLAVATA1 precursor, putative (EC:1.3.1.74)
nr
ID XP_002526749.1
description Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
swissprot
ID Q9FL51
description Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1
trembl
ID B9SL80
description Receptor protein kinase CLAVATA1, putative OS=Ricinus communis GN=RCOM_0091750 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probably inactive leucine-rich repeat receptor-like protein kinase at5g06940

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113945_010 0.0 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
2 Hb_170861_010 0.0642888033 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
3 Hb_000106_060 0.06828117 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
4 Hb_039096_010 0.0836490244 - - unknown [Populus trichocarpa]
5 Hb_000934_180 0.0866757484 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
6 Hb_007161_020 0.0996469238 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
7 Hb_002876_190 0.1030672273 transcription factor TF Family: GRAS hypothetical protein PRUPE_ppa017519mg [Prunus persica]
8 Hb_120357_010 0.120433987 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
9 Hb_001775_130 0.1218297518 - - Prephenate dehydratase [Hevea brasiliensis]
10 Hb_080068_010 0.1231539689 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
11 Hb_003371_040 0.1315115837 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
12 Hb_000011_320 0.1358349162 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
13 Hb_000429_030 0.137856014 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_003304_090 0.1406621629 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
15 Hb_004397_010 0.1517947267 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
16 Hb_003212_020 0.1529969727 - - hypothetical protein PHAVU_009G114800g [Phaseolus vulgaris]
17 Hb_000561_040 0.1548273369 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
18 Hb_003171_070 0.1609803682 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Citrus sinensis]
19 Hb_008727_040 0.1624592411 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000098_210 0.1652635892 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]

Gene co-expression network

sample Hb_113945_010 Hb_113945_010 Hb_170861_010 Hb_170861_010 Hb_113945_010--Hb_170861_010 Hb_000106_060 Hb_000106_060 Hb_113945_010--Hb_000106_060 Hb_039096_010 Hb_039096_010 Hb_113945_010--Hb_039096_010 Hb_000934_180 Hb_000934_180 Hb_113945_010--Hb_000934_180 Hb_007161_020 Hb_007161_020 Hb_113945_010--Hb_007161_020 Hb_002876_190 Hb_002876_190 Hb_113945_010--Hb_002876_190 Hb_170861_010--Hb_000106_060 Hb_170861_010--Hb_000934_180 Hb_170861_010--Hb_039096_010 Hb_120357_010 Hb_120357_010 Hb_170861_010--Hb_120357_010 Hb_170861_010--Hb_002876_190 Hb_000106_060--Hb_039096_010 Hb_000106_060--Hb_000934_180 Hb_000106_060--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_000106_060--Hb_001775_130 Hb_039096_010--Hb_002876_190 Hb_039096_010--Hb_001775_130 Hb_039096_010--Hb_000934_180 Hb_000934_180--Hb_120357_010 Hb_000934_180--Hb_002876_190 Hb_007161_020--Hb_170861_010 Hb_007161_020--Hb_000106_060 Hb_000429_030 Hb_000429_030 Hb_007161_020--Hb_000429_030 Hb_007161_020--Hb_039096_010 Hb_080068_010 Hb_080068_010 Hb_007161_020--Hb_080068_010 Hb_002876_190--Hb_001775_130 Hb_003371_040 Hb_003371_040 Hb_002876_190--Hb_003371_040 Hb_006314_020 Hb_006314_020 Hb_002876_190--Hb_006314_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.149443 0.094472 1.74506 0.0195367 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.904322 0.231062

CAGE analysis