Hb_114121_010

Information

Type -
Description -
Location Contig114121: 5318-5837
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114121_010 0.0 - - -
2 Hb_002733_050 0.032950255 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
3 Hb_168909_010 0.0540428603 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
4 Hb_008755_020 0.0756938415 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_179183_010 0.0828258497 - - RALF-LIKE 32 family protein [Populus trichocarpa]
6 Hb_006013_030 0.0832933488 - - -
7 Hb_000280_120 0.1064453977 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
8 Hb_056506_080 0.1153453741 - - PREDICTED: uncharacterized protein LOC104888944 [Beta vulgaris subsp. vulgaris]
9 Hb_020400_010 0.1165281618 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
10 Hb_000243_050 0.1186847566 - - ADP-ribosylation factor, putative [Ricinus communis]
11 Hb_001301_070 0.1235682288 - - -
12 Hb_006120_160 0.1250905739 - - -
13 Hb_101034_010 0.1320581967 - - -
14 Hb_005432_020 0.1379983229 - - -
15 Hb_138667_010 0.1384118384 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
16 Hb_072173_010 0.1397889964 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
17 Hb_000192_060 0.1403222583 - - -
18 Hb_000916_010 0.142009265 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
19 Hb_039547_010 0.1424371682 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
20 Hb_014967_010 0.1439453829 - - -

Gene co-expression network

sample Hb_114121_010 Hb_114121_010 Hb_002733_050 Hb_002733_050 Hb_114121_010--Hb_002733_050 Hb_168909_010 Hb_168909_010 Hb_114121_010--Hb_168909_010 Hb_008755_020 Hb_008755_020 Hb_114121_010--Hb_008755_020 Hb_179183_010 Hb_179183_010 Hb_114121_010--Hb_179183_010 Hb_006013_030 Hb_006013_030 Hb_114121_010--Hb_006013_030 Hb_000280_120 Hb_000280_120 Hb_114121_010--Hb_000280_120 Hb_002733_050--Hb_006013_030 Hb_002733_050--Hb_168909_010 Hb_002733_050--Hb_008755_020 Hb_002733_050--Hb_000280_120 Hb_020400_010 Hb_020400_010 Hb_002733_050--Hb_020400_010 Hb_168909_010--Hb_000280_120 Hb_000243_050 Hb_000243_050 Hb_168909_010--Hb_000243_050 Hb_001301_070 Hb_001301_070 Hb_168909_010--Hb_001301_070 Hb_168909_010--Hb_179183_010 Hb_056506_080 Hb_056506_080 Hb_008755_020--Hb_056506_080 Hb_006120_160 Hb_006120_160 Hb_008755_020--Hb_006120_160 Hb_008755_020--Hb_179183_010 Hb_014967_010 Hb_014967_010 Hb_008755_020--Hb_014967_010 Hb_101034_010 Hb_101034_010 Hb_008755_020--Hb_101034_010 Hb_179183_010--Hb_006120_160 Hb_179183_010--Hb_101034_010 Hb_159124_010 Hb_159124_010 Hb_179183_010--Hb_159124_010 Hb_000916_010 Hb_000916_010 Hb_179183_010--Hb_000916_010 Hb_039547_010 Hb_039547_010 Hb_179183_010--Hb_039547_010 Hb_005432_020 Hb_005432_020 Hb_179183_010--Hb_005432_020 Hb_000959_370 Hb_000959_370 Hb_006013_030--Hb_000959_370 Hb_006013_030--Hb_000280_120 Hb_006013_030--Hb_168909_010 Hb_006013_030--Hb_020400_010 Hb_138667_010 Hb_138667_010 Hb_000280_120--Hb_138667_010 Hb_000280_120--Hb_000243_050 Hb_028872_040 Hb_028872_040 Hb_000280_120--Hb_028872_040 Hb_003938_100 Hb_003938_100 Hb_000280_120--Hb_003938_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.187931 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.210332 0.456328

CAGE analysis