Hb_114250_010

Information

Type -
Description -
Location Contig114250: 527-1423
Sequence    

Annotation

kegg
ID rcu:RCOM_1298940
description hypothetical protein
nr
ID XP_002519378.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S059
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1298940 PE=4 SV=1
Gene Ontology
ID GO:0008289
description pctp-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114250_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_115513_030 0.1605290941 - - PREDICTED: uncharacterized protein At2g34160 [Jatropha curcas]
3 Hb_114674_010 0.1757973483 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
4 Hb_008203_020 0.217373334 - - protein kinase, putative [Ricinus communis]
5 Hb_049884_010 0.2349751367 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
6 Hb_015928_020 0.246185273 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
7 Hb_029689_010 0.2524198231 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
8 Hb_000819_040 0.254621613 - - ATP binding protein, putative [Ricinus communis]
9 Hb_012264_010 0.2654865535 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_095575_010 0.2702350796 - - hypothetical protein JCGZ_19529 [Jatropha curcas]
11 Hb_004021_090 0.2726434527 - - hypothetical protein JCGZ_09233 [Jatropha curcas]
12 Hb_007188_060 0.2767288478 - - -
13 Hb_074184_010 0.28057649 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
14 Hb_011942_030 0.2806596081 - - -
15 Hb_002897_020 0.2821063466 - - phosphate transporter [Manihot esculenta]
16 Hb_000926_110 0.2832943158 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
17 Hb_001277_190 0.2921953726 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
18 Hb_000787_010 0.2930576952 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
19 Hb_009302_010 0.2963772475 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_004968_010 0.2991913636 - - PREDICTED: receptor-like protein 12 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_114250_010 Hb_114250_010 Hb_115513_030 Hb_115513_030 Hb_114250_010--Hb_115513_030 Hb_114674_010 Hb_114674_010 Hb_114250_010--Hb_114674_010 Hb_008203_020 Hb_008203_020 Hb_114250_010--Hb_008203_020 Hb_049884_010 Hb_049884_010 Hb_114250_010--Hb_049884_010 Hb_015928_020 Hb_015928_020 Hb_114250_010--Hb_015928_020 Hb_029689_010 Hb_029689_010 Hb_114250_010--Hb_029689_010 Hb_002897_020 Hb_002897_020 Hb_115513_030--Hb_002897_020 Hb_115513_030--Hb_114674_010 Hb_000819_020 Hb_000819_020 Hb_115513_030--Hb_000819_020 Hb_115513_030--Hb_008203_020 Hb_000836_180 Hb_000836_180 Hb_115513_030--Hb_000836_180 Hb_114674_010--Hb_008203_020 Hb_095575_010 Hb_095575_010 Hb_114674_010--Hb_095575_010 Hb_114674_010--Hb_029689_010 Hb_181824_010 Hb_181824_010 Hb_114674_010--Hb_181824_010 Hb_074184_010 Hb_074184_010 Hb_008203_020--Hb_074184_010 Hb_007951_120 Hb_007951_120 Hb_008203_020--Hb_007951_120 Hb_007188_060 Hb_007188_060 Hb_008203_020--Hb_007188_060 Hb_008203_020--Hb_015928_020 Hb_164225_010 Hb_164225_010 Hb_049884_010--Hb_164225_010 Hb_011942_030 Hb_011942_030 Hb_049884_010--Hb_011942_030 Hb_049884_010--Hb_007188_060 Hb_004800_210 Hb_004800_210 Hb_049884_010--Hb_004800_210 Hb_004117_250 Hb_004117_250 Hb_049884_010--Hb_004117_250 Hb_014361_050 Hb_014361_050 Hb_015928_020--Hb_014361_050 Hb_061466_020 Hb_061466_020 Hb_015928_020--Hb_061466_020 Hb_000997_010 Hb_000997_010 Hb_015928_020--Hb_000997_010 Hb_015928_020--Hb_074184_010 Hb_006286_010 Hb_006286_010 Hb_015928_020--Hb_006286_010 Hb_000059_260 Hb_000059_260 Hb_029689_010--Hb_000059_260 Hb_002311_150 Hb_002311_150 Hb_029689_010--Hb_002311_150 Hb_183192_010 Hb_183192_010 Hb_029689_010--Hb_183192_010 Hb_029689_010--Hb_074184_010 Hb_007120_010 Hb_007120_010 Hb_029689_010--Hb_007120_010 Hb_033149_020 Hb_033149_020 Hb_029689_010--Hb_033149_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.332171 1.01351 0.405024 0.173867 0 0.138218
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis