Hb_114310_040

Information

Type -
Description -
Location Contig114310: 20121-23253
Sequence    

Annotation

kegg
ID vvi:100246877
description purple acid phosphatase
nr
ID XP_012071955.1
description PREDICTED: purple acid phosphatase 2-like [Jatropha curcas]
swissprot
ID Q9SDZ9
description Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1
trembl
ID E6NU63
description Purple acid phosphatase OS=Jatropha curcas GN=JHL18I08.7 PE=3 SV=1
Gene Ontology
ID GO:0005829
description purple acid phosphatase 2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114310_040 0.0 - - PREDICTED: purple acid phosphatase 2-like [Jatropha curcas]
2 Hb_011218_080 0.1196330847 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
3 Hb_000920_270 0.1299530096 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_24521 [Jatropha curcas]
4 Hb_002078_420 0.1318032918 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
5 Hb_011861_070 0.1344691798 - - F-box/LRR-repeat protein, putative [Ricinus communis]
6 Hb_004096_080 0.1425842281 - - PREDICTED: IST1 homolog [Jatropha curcas]
7 Hb_005052_010 0.1472330411 - - PREDICTED: uncharacterized protein LOC103339315 [Prunus mume]
8 Hb_001140_250 0.14763415 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
9 Hb_002960_060 0.1544983208 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Jatropha curcas]
10 Hb_002725_070 0.1545088895 - - hypothetical protein PRUPE_ppa005949mg [Prunus persica]
11 Hb_015763_020 0.1617585115 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
12 Hb_010080_060 0.1625021498 - - receptor protein kinase, putative [Ricinus communis]
13 Hb_001529_060 0.1625699381 - - PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Jatropha curcas]
14 Hb_000029_160 0.162906811 - - Nitrilase, putative [Ricinus communis]
15 Hb_007416_310 0.1635405603 - - PREDICTED: zinc finger protein 622 [Jatropha curcas]
16 Hb_117950_020 0.1639916865 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Jatropha curcas]
17 Hb_001009_290 0.1642975445 - - PREDICTED: elongator complex protein 3-like [Populus euphratica]
18 Hb_002820_040 0.1646387044 - - conserved hypothetical protein [Ricinus communis]
19 Hb_011344_170 0.1658151633 - - PREDICTED: UDP-glucuronate 4-epimerase 4-like, partial [Camelina sativa]
20 Hb_011612_010 0.1699176919 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]

Gene co-expression network

sample Hb_114310_040 Hb_114310_040 Hb_011218_080 Hb_011218_080 Hb_114310_040--Hb_011218_080 Hb_000920_270 Hb_000920_270 Hb_114310_040--Hb_000920_270 Hb_002078_420 Hb_002078_420 Hb_114310_040--Hb_002078_420 Hb_011861_070 Hb_011861_070 Hb_114310_040--Hb_011861_070 Hb_004096_080 Hb_004096_080 Hb_114310_040--Hb_004096_080 Hb_005052_010 Hb_005052_010 Hb_114310_040--Hb_005052_010 Hb_002820_040 Hb_002820_040 Hb_011218_080--Hb_002820_040 Hb_007416_310 Hb_007416_310 Hb_011218_080--Hb_007416_310 Hb_004608_020 Hb_004608_020 Hb_011218_080--Hb_004608_020 Hb_002675_060 Hb_002675_060 Hb_011218_080--Hb_002675_060 Hb_002725_070 Hb_002725_070 Hb_011218_080--Hb_002725_070 Hb_000398_190 Hb_000398_190 Hb_000920_270--Hb_000398_190 Hb_006478_110 Hb_006478_110 Hb_000920_270--Hb_006478_110 Hb_000490_030 Hb_000490_030 Hb_000920_270--Hb_000490_030 Hb_011671_330 Hb_011671_330 Hb_000920_270--Hb_011671_330 Hb_006091_030 Hb_006091_030 Hb_000920_270--Hb_006091_030 Hb_000029_160 Hb_000029_160 Hb_002078_420--Hb_000029_160 Hb_000172_550 Hb_000172_550 Hb_002078_420--Hb_000172_550 Hb_000016_280 Hb_000016_280 Hb_002078_420--Hb_000016_280 Hb_013753_010 Hb_013753_010 Hb_002078_420--Hb_013753_010 Hb_000331_480 Hb_000331_480 Hb_002078_420--Hb_000331_480 Hb_000076_290 Hb_000076_290 Hb_002078_420--Hb_000076_290 Hb_010080_060 Hb_010080_060 Hb_011861_070--Hb_010080_060 Hb_003866_020 Hb_003866_020 Hb_011861_070--Hb_003866_020 Hb_000078_100 Hb_000078_100 Hb_011861_070--Hb_000078_100 Hb_005635_010 Hb_005635_010 Hb_011861_070--Hb_005635_010 Hb_011861_070--Hb_002725_070 Hb_000227_380 Hb_000227_380 Hb_011861_070--Hb_000227_380 Hb_001396_260 Hb_001396_260 Hb_004096_080--Hb_001396_260 Hb_084429_010 Hb_084429_010 Hb_004096_080--Hb_084429_010 Hb_015763_020 Hb_015763_020 Hb_004096_080--Hb_015763_020 Hb_004096_080--Hb_002078_420 Hb_004096_080--Hb_011861_070 Hb_001633_100 Hb_001633_100 Hb_005052_010--Hb_001633_100 Hb_011344_170 Hb_011344_170 Hb_005052_010--Hb_011344_170 Hb_000120_570 Hb_000120_570 Hb_005052_010--Hb_000120_570 Hb_001529_060 Hb_001529_060 Hb_005052_010--Hb_001529_060 Hb_005052_010--Hb_003866_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.93056 7.00082 1.79293 0.482076 13.7687 9.18044
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.59589 2.74896 3.79184 7.71032 0.133391

CAGE analysis