Hb_115114_010

Information

Type -
Description -
Location Contig115114: 1-797
Sequence    

Annotation

kegg
ID rcu:RCOM_1038840
description hypothetical protein
nr
ID XP_002514011.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJU2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1038840 PE=4 SV=1
Gene Ontology
ID GO:0008270
description myb-like protein h isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115114_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_132259_010 0.06841814 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
3 Hb_001046_040 0.086805231 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_004879_030 0.0915503737 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
5 Hb_044624_010 0.0943076893 - - -
6 Hb_000140_220 0.0949211856 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 22 [Jatropha curcas]
7 Hb_000813_090 0.0964729523 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
8 Hb_009557_080 0.0985879569 - - PREDICTED: glutaredoxin-C9-like [Populus euphratica]
9 Hb_152414_010 0.1041055487 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
10 Hb_000015_230 0.1041364237 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
11 Hb_004324_220 0.1057347926 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
12 Hb_026415_010 0.1126794096 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
13 Hb_001821_050 0.1151903797 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
14 Hb_006358_030 0.1154650134 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
15 Hb_000032_590 0.1158265589 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
16 Hb_003073_040 0.1191415802 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
17 Hb_000325_070 0.1232036083 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_022487_010 0.1278677722 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
19 Hb_004724_300 0.1304820032 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
20 Hb_171900_110 0.1344221015 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]

Gene co-expression network

sample Hb_115114_010 Hb_115114_010 Hb_132259_010 Hb_132259_010 Hb_115114_010--Hb_132259_010 Hb_001046_040 Hb_001046_040 Hb_115114_010--Hb_001046_040 Hb_004879_030 Hb_004879_030 Hb_115114_010--Hb_004879_030 Hb_044624_010 Hb_044624_010 Hb_115114_010--Hb_044624_010 Hb_000140_220 Hb_000140_220 Hb_115114_010--Hb_000140_220 Hb_000813_090 Hb_000813_090 Hb_115114_010--Hb_000813_090 Hb_000015_230 Hb_000015_230 Hb_132259_010--Hb_000015_230 Hb_003073_040 Hb_003073_040 Hb_132259_010--Hb_003073_040 Hb_132259_010--Hb_004879_030 Hb_132259_010--Hb_000140_220 Hb_000032_590 Hb_000032_590 Hb_132259_010--Hb_000032_590 Hb_001046_040--Hb_044624_010 Hb_001046_040--Hb_000813_090 Hb_004324_220 Hb_004324_220 Hb_001046_040--Hb_004324_220 Hb_175670_010 Hb_175670_010 Hb_001046_040--Hb_175670_010 Hb_004143_140 Hb_004143_140 Hb_001046_040--Hb_004143_140 Hb_026415_010 Hb_026415_010 Hb_004879_030--Hb_026415_010 Hb_152414_010 Hb_152414_010 Hb_004879_030--Hb_152414_010 Hb_000325_070 Hb_000325_070 Hb_004879_030--Hb_000325_070 Hb_009557_080 Hb_009557_080 Hb_004879_030--Hb_009557_080 Hb_006358_030 Hb_006358_030 Hb_004879_030--Hb_006358_030 Hb_044624_010--Hb_004324_220 Hb_022487_010 Hb_022487_010 Hb_044624_010--Hb_022487_010 Hb_044624_010--Hb_175670_010 Hb_044624_010--Hb_000813_090 Hb_003579_010 Hb_003579_010 Hb_000140_220--Hb_003579_010 Hb_000140_220--Hb_003073_040 Hb_000140_220--Hb_009557_080 Hb_000049_290 Hb_000049_290 Hb_000140_220--Hb_000049_290 Hb_000140_220--Hb_004324_220 Hb_000813_090--Hb_026415_010 Hb_000813_090--Hb_009557_080 Hb_000041_160 Hb_000041_160 Hb_000813_090--Hb_000041_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 58.524 20.8517 26.6014 0.0374844 0.0504787
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0677747 0 2.32117 40.6461

CAGE analysis