Hb_115137_010

Information

Type -
Description -
Location Contig115137: 1720-3085
Sequence    

Annotation

kegg
ID rcu:RCOM_0816850
description Palmitoyltransferase TIP1, putative (EC:1.3.1.74)
nr
ID XP_012074546.1
description PREDICTED: probable protein S-acyltransferase 23 isoform X2 [Jatropha curcas]
swissprot
ID Q3EC11
description Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana GN=PAT23 PE=2 SV=2
trembl
ID A0A067KUG2
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_09892 PE=3 SV=1
Gene Ontology
ID GO:0016020
description probable protein s-acyltransferase 23

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115137_010 0.0 - - PREDICTED: probable protein S-acyltransferase 23 isoform X2 [Jatropha curcas]
2 Hb_060094_010 0.0650666527 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Jatropha curcas]
3 Hb_006468_010 0.0798604032 - - PREDICTED: eukaryotic translation initiation factor isoform 4G-1 isoform X1 [Jatropha curcas]
4 Hb_001250_050 0.0885667996 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
5 Hb_005305_100 0.0912027645 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
6 Hb_000120_810 0.0931617693 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
7 Hb_003428_090 0.0950793231 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 [Jatropha curcas]
8 Hb_016461_020 0.0960407134 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000890_160 0.0973007803 - - PREDICTED: anaphase-promoting complex subunit 7 [Jatropha curcas]
10 Hb_004531_150 0.0978831557 - - PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
11 Hb_004079_130 0.0990413264 - - PREDICTED: uncharacterized protein LOC105637708 [Jatropha curcas]
12 Hb_000926_260 0.0994821432 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001408_110 0.1003011828 - - hypothetical protein EUGRSUZ_I02762 [Eucalyptus grandis]
14 Hb_003777_030 0.1013183302 - - Exocyst complex component, putative [Ricinus communis]
15 Hb_003636_080 0.1020173829 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Jatropha curcas]
16 Hb_026198_010 0.1022272593 - - PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas]
17 Hb_002739_120 0.10551888 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
18 Hb_002740_090 0.1070861521 - - PREDICTED: putative membrane-bound O-acyltransferase C24H6.01c [Jatropha curcas]
19 Hb_000680_120 0.1071570133 - - PREDICTED: uncharacterized protein LOC105631461 [Jatropha curcas]
20 Hb_089140_040 0.1081942566 - - PREDICTED: uncharacterized protein LOC105637966 [Jatropha curcas]

Gene co-expression network

sample Hb_115137_010 Hb_115137_010 Hb_060094_010 Hb_060094_010 Hb_115137_010--Hb_060094_010 Hb_006468_010 Hb_006468_010 Hb_115137_010--Hb_006468_010 Hb_001250_050 Hb_001250_050 Hb_115137_010--Hb_001250_050 Hb_005305_100 Hb_005305_100 Hb_115137_010--Hb_005305_100 Hb_000120_810 Hb_000120_810 Hb_115137_010--Hb_000120_810 Hb_003428_090 Hb_003428_090 Hb_115137_010--Hb_003428_090 Hb_002965_050 Hb_002965_050 Hb_060094_010--Hb_002965_050 Hb_060094_010--Hb_005305_100 Hb_060094_010--Hb_003428_090 Hb_009372_020 Hb_009372_020 Hb_060094_010--Hb_009372_020 Hb_010068_070 Hb_010068_070 Hb_060094_010--Hb_010068_070 Hb_000890_160 Hb_000890_160 Hb_006468_010--Hb_000890_160 Hb_003636_080 Hb_003636_080 Hb_006468_010--Hb_003636_080 Hb_000297_030 Hb_000297_030 Hb_006468_010--Hb_000297_030 Hb_016461_020 Hb_016461_020 Hb_006468_010--Hb_016461_020 Hb_089140_040 Hb_089140_040 Hb_006468_010--Hb_089140_040 Hb_003777_030 Hb_003777_030 Hb_001250_050--Hb_003777_030 Hb_002687_180 Hb_002687_180 Hb_001250_050--Hb_002687_180 Hb_001279_190 Hb_001279_190 Hb_001250_050--Hb_001279_190 Hb_000753_160 Hb_000753_160 Hb_001250_050--Hb_000753_160 Hb_002739_120 Hb_002739_120 Hb_001250_050--Hb_002739_120 Hb_008289_040 Hb_008289_040 Hb_001250_050--Hb_008289_040 Hb_000956_040 Hb_000956_040 Hb_005305_100--Hb_000956_040 Hb_000300_030 Hb_000300_030 Hb_005305_100--Hb_000300_030 Hb_000172_360 Hb_000172_360 Hb_005305_100--Hb_000172_360 Hb_008165_020 Hb_008165_020 Hb_005305_100--Hb_008165_020 Hb_000179_190 Hb_000179_190 Hb_005305_100--Hb_000179_190 Hb_000110_350 Hb_000110_350 Hb_005305_100--Hb_000110_350 Hb_000704_030 Hb_000704_030 Hb_000120_810--Hb_000704_030 Hb_026198_010 Hb_026198_010 Hb_000120_810--Hb_026198_010 Hb_004079_130 Hb_004079_130 Hb_000120_810--Hb_004079_130 Hb_000603_160 Hb_000603_160 Hb_000120_810--Hb_000603_160 Hb_189216_010 Hb_189216_010 Hb_000120_810--Hb_189216_010 Hb_000680_120 Hb_000680_120 Hb_000120_810--Hb_000680_120 Hb_003687_120 Hb_003687_120 Hb_003428_090--Hb_003687_120 Hb_000866_140 Hb_000866_140 Hb_003428_090--Hb_000866_140 Hb_000156_090 Hb_000156_090 Hb_003428_090--Hb_000156_090 Hb_002686_150 Hb_002686_150 Hb_003428_090--Hb_002686_150 Hb_003428_090--Hb_000890_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.56555 6.82087 7.82909 8.10392 1.70043 3.09295
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.31181 2.70591 1.23619 5.18797 4.67773

CAGE analysis