Hb_115414_010

Information

Type -
Description -
Location Contig115414: 1601-2581
Sequence    

Annotation

kegg
ID vvi:100241851
description zinc-metallopeptidase, peroxisomal
nr
ID XP_012086165.1
description PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
swissprot
ID O22941
description Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1
trembl
ID A0A067K2N1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21092 PE=3 SV=1
Gene Ontology
ID GO:0003824
description zinc- peroxisomal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115414_010 0.0 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
2 Hb_035726_010 0.1069084646 - - Insulin-degrading enzyme, putative [Ricinus communis]
3 Hb_033843_020 0.1076829862 - - lysosomal alpha-mannosidase, putative [Ricinus communis]
4 Hb_001172_030 0.1150457899 - - PREDICTED: protein NRT1/ PTR FAMILY 7.2-like isoform X1 [Jatropha curcas]
5 Hb_035726_020 0.1194529839 - - Insulinase (Peptidase family M16) family protein [Theobroma cacao]
6 Hb_022815_020 0.1322987452 - - PREDICTED: uncharacterized protein LOC105650107 [Jatropha curcas]
7 Hb_001003_020 0.13299959 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
8 Hb_039791_010 0.1335115216 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like isoform X2 [Jatropha curcas]
9 Hb_001221_120 0.1377755629 - - cytochrome P450, putative [Ricinus communis]
10 Hb_002890_050 0.1385733128 - - -
11 Hb_014034_010 0.1388984181 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_001514_160 0.1405537298 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
13 Hb_009142_030 0.1412774705 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_055880_010 0.142440418 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_001959_280 0.1447395862 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
16 Hb_159957_020 0.1531675232 - - -
17 Hb_000159_030 0.1540560475 - - putative glycosyltransferase, partial [Aralia elata]
18 Hb_003189_030 0.1595668111 - - hypothetical protein Csa_4G304750 [Cucumis sativus]
19 Hb_005171_060 0.160443113 - - alcohol dehydrogenase, putative [Ricinus communis]
20 Hb_000967_030 0.163965785 - - -

Gene co-expression network

sample Hb_115414_010 Hb_115414_010 Hb_035726_010 Hb_035726_010 Hb_115414_010--Hb_035726_010 Hb_033843_020 Hb_033843_020 Hb_115414_010--Hb_033843_020 Hb_001172_030 Hb_001172_030 Hb_115414_010--Hb_001172_030 Hb_035726_020 Hb_035726_020 Hb_115414_010--Hb_035726_020 Hb_022815_020 Hb_022815_020 Hb_115414_010--Hb_022815_020 Hb_001003_020 Hb_001003_020 Hb_115414_010--Hb_001003_020 Hb_035726_010--Hb_033843_020 Hb_035726_010--Hb_035726_020 Hb_035726_010--Hb_001172_030 Hb_035726_010--Hb_022815_020 Hb_035726_010--Hb_001003_020 Hb_033843_020--Hb_035726_020 Hb_033843_020--Hb_001172_030 Hb_033843_020--Hb_022815_020 Hb_033843_020--Hb_001003_020 Hb_001172_030--Hb_022815_020 Hb_001172_030--Hb_035726_020 Hb_001172_030--Hb_001003_020 Hb_000659_010 Hb_000659_010 Hb_001172_030--Hb_000659_010 Hb_035726_020--Hb_001003_020 Hb_003189_030 Hb_003189_030 Hb_035726_020--Hb_003189_030 Hb_035726_020--Hb_022815_020 Hb_035726_020--Hb_000659_010 Hb_022815_020--Hb_000659_010 Hb_022815_020--Hb_001003_020 Hb_004222_010 Hb_004222_010 Hb_022815_020--Hb_004222_010 Hb_001003_020--Hb_003189_030 Hb_001003_020--Hb_000659_010 Hb_001003_020--Hb_004222_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0565882 0.131707 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.4582 0.945375

CAGE analysis