Hb_115435_010

Information

Type -
Description -
Location Contig115435: 569-929
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115435_010 0.0 - - -
2 Hb_000307_010 0.1999832026 - - PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
3 Hb_006120_080 0.2054773629 - - PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Jatropha curcas]
4 Hb_009421_050 0.2347591366 - - PREDICTED: uncharacterized protein LOC105647037 [Jatropha curcas]
5 Hb_002368_030 0.2400478336 transcription factor TF Family: GRAS PREDICTED: DELLA protein GAIP-B [Jatropha curcas]
6 Hb_146420_010 0.2415543 - - alcohol dehydrogenase, putative [Ricinus communis]
7 Hb_000975_370 0.2503027819 transcription factor TF Family: MYB PREDICTED: transcription factor MYB59 isoform X1 [Jatropha curcas]
8 Hb_004116_180 0.2523741425 - - PREDICTED: uncharacterized protein LOC105646147 [Jatropha curcas]
9 Hb_004013_020 0.2546339984 - - PREDICTED: F-box protein SKIP2 [Jatropha curcas]
10 Hb_000856_020 0.2561003547 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
11 Hb_000853_220 0.2570071306 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
12 Hb_004837_050 0.2578750911 - - -
13 Hb_001366_130 0.2579891819 - - unnamed protein product [Coffea canephora]
14 Hb_000544_020 0.2592246649 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
15 Hb_000920_290 0.2600286514 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
16 Hb_001541_160 0.2609320464 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
17 Hb_138585_100 0.2626407775 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
18 Hb_000270_230 0.2627498627 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
19 Hb_002968_030 0.2638986298 - - Pectinesterase-1 precursor, putative [Ricinus communis]
20 Hb_000065_090 0.2648470238 - - potassium channel tetramerization domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_115435_010 Hb_115435_010 Hb_000307_010 Hb_000307_010 Hb_115435_010--Hb_000307_010 Hb_006120_080 Hb_006120_080 Hb_115435_010--Hb_006120_080 Hb_009421_050 Hb_009421_050 Hb_115435_010--Hb_009421_050 Hb_002368_030 Hb_002368_030 Hb_115435_010--Hb_002368_030 Hb_146420_010 Hb_146420_010 Hb_115435_010--Hb_146420_010 Hb_000975_370 Hb_000975_370 Hb_115435_010--Hb_000975_370 Hb_000065_090 Hb_000065_090 Hb_000307_010--Hb_000065_090 Hb_004116_180 Hb_004116_180 Hb_000307_010--Hb_004116_180 Hb_004013_020 Hb_004013_020 Hb_000307_010--Hb_004013_020 Hb_000307_010--Hb_002368_030 Hb_000567_240 Hb_000567_240 Hb_000307_010--Hb_000567_240 Hb_004994_300 Hb_004994_300 Hb_000307_010--Hb_004994_300 Hb_001366_130 Hb_001366_130 Hb_006120_080--Hb_001366_130 Hb_004837_050 Hb_004837_050 Hb_006120_080--Hb_004837_050 Hb_002804_010 Hb_002804_010 Hb_006120_080--Hb_002804_010 Hb_178793_010 Hb_178793_010 Hb_006120_080--Hb_178793_010 Hb_002073_020 Hb_002073_020 Hb_006120_080--Hb_002073_020 Hb_002874_170 Hb_002874_170 Hb_006120_080--Hb_002874_170 Hb_178658_010 Hb_178658_010 Hb_009421_050--Hb_178658_010 Hb_000003_760 Hb_000003_760 Hb_009421_050--Hb_000003_760 Hb_009557_050 Hb_009557_050 Hb_009421_050--Hb_009557_050 Hb_001541_160 Hb_001541_160 Hb_009421_050--Hb_001541_160 Hb_001956_190 Hb_001956_190 Hb_009421_050--Hb_001956_190 Hb_000336_190 Hb_000336_190 Hb_009421_050--Hb_000336_190 Hb_002774_150 Hb_002774_150 Hb_002368_030--Hb_002774_150 Hb_001662_170 Hb_001662_170 Hb_002368_030--Hb_001662_170 Hb_002471_020 Hb_002471_020 Hb_002368_030--Hb_002471_020 Hb_172421_010 Hb_172421_010 Hb_002368_030--Hb_172421_010 Hb_002534_050 Hb_002534_050 Hb_002368_030--Hb_002534_050 Hb_029695_120 Hb_029695_120 Hb_146420_010--Hb_029695_120 Hb_001999_320 Hb_001999_320 Hb_146420_010--Hb_001999_320 Hb_001484_090 Hb_001484_090 Hb_146420_010--Hb_001484_090 Hb_003687_010 Hb_003687_010 Hb_146420_010--Hb_003687_010 Hb_003912_080 Hb_003912_080 Hb_146420_010--Hb_003912_080 Hb_002686_210 Hb_002686_210 Hb_146420_010--Hb_002686_210 Hb_000975_370--Hb_004013_020 Hb_000975_370--Hb_001541_160 Hb_000753_120 Hb_000753_120 Hb_000975_370--Hb_000753_120 Hb_000975_370--Hb_000065_090 Hb_002973_030 Hb_002973_030 Hb_000975_370--Hb_002973_030 Hb_002004_010 Hb_002004_010 Hb_000975_370--Hb_002004_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.4333 2.64894 0.362028 1.36217 0 1.08766
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.25823 0.405872 0 0.359304 1.35843

CAGE analysis