Hb_115445_010

Information

Type -
Description -
Location Contig115445: 59-448
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115445_010 0.0 - - -
2 Hb_003712_010 0.1401239786 - - protein binding protein, putative [Ricinus communis]
3 Hb_000635_190 0.158882816 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
4 Hb_096878_010 0.1613877779 - - hypothetical protein POPTR_0112s002001g, partial [Populus trichocarpa]
5 Hb_006721_060 0.1642439305 - - RnaseH (mitochondrion) [Malus domestica]
6 Hb_071433_010 0.1664387001 - - lipid binding protein, putative [Ricinus communis]
7 Hb_185830_090 0.1763717825 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003878_020 0.1769594366 - - Epidermis-specific secreted glycoprotein EP1 precursor, putative [Ricinus communis]
9 Hb_003050_170 0.1797237655 - - conserved hypothetical protein [Ricinus communis]
10 Hb_170632_010 0.1863302881 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
11 Hb_000975_090 0.1864478407 - - Zeamatin precursor, putative [Ricinus communis]
12 Hb_000172_310 0.1869733883 - - PREDICTED: fasciclin-like arabinogalactan protein 21 [Jatropha curcas]
13 Hb_019733_020 0.1873976447 - - hypothetical protein POPTR_0003s15470g [Populus trichocarpa]
14 Hb_014549_010 0.1920704945 - - PREDICTED: uncharacterized protein LOC101512634 [Cicer arietinum]
15 Hb_133508_020 0.1936049538 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
16 Hb_004096_140 0.2001069283 - - Lipase, putative [Ricinus communis]
17 Hb_002805_100 0.2022501729 - - Receptor-like protein 12 [Morus notabilis]
18 Hb_000060_080 0.2023416266 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
19 Hb_006916_120 0.2040200049 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
20 Hb_004154_010 0.205279439 - - Rop guanine nucleotide exchange factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_115445_010 Hb_115445_010 Hb_003712_010 Hb_003712_010 Hb_115445_010--Hb_003712_010 Hb_000635_190 Hb_000635_190 Hb_115445_010--Hb_000635_190 Hb_096878_010 Hb_096878_010 Hb_115445_010--Hb_096878_010 Hb_006721_060 Hb_006721_060 Hb_115445_010--Hb_006721_060 Hb_071433_010 Hb_071433_010 Hb_115445_010--Hb_071433_010 Hb_185830_090 Hb_185830_090 Hb_115445_010--Hb_185830_090 Hb_003712_010--Hb_000635_190 Hb_003712_010--Hb_096878_010 Hb_003712_010--Hb_006721_060 Hb_133508_020 Hb_133508_020 Hb_003712_010--Hb_133508_020 Hb_003712_010--Hb_185830_090 Hb_000635_190--Hb_096878_010 Hb_000635_190--Hb_006721_060 Hb_003050_170 Hb_003050_170 Hb_000635_190--Hb_003050_170 Hb_000635_190--Hb_185830_090 Hb_000172_310 Hb_000172_310 Hb_000635_190--Hb_000172_310 Hb_004096_140 Hb_004096_140 Hb_000635_190--Hb_004096_140 Hb_096878_010--Hb_185830_090 Hb_096878_010--Hb_006721_060 Hb_096878_010--Hb_000172_310 Hb_096878_010--Hb_003050_170 Hb_096878_010--Hb_133508_020 Hb_006721_060--Hb_004096_140 Hb_006721_060--Hb_003050_170 Hb_006721_060--Hb_000172_310 Hb_000060_080 Hb_000060_080 Hb_006721_060--Hb_000060_080 Hb_036029_020 Hb_036029_020 Hb_071433_010--Hb_036029_020 Hb_011120_030 Hb_011120_030 Hb_071433_010--Hb_011120_030 Hb_019733_020 Hb_019733_020 Hb_071433_010--Hb_019733_020 Hb_000975_090 Hb_000975_090 Hb_071433_010--Hb_000975_090 Hb_005214_050 Hb_005214_050 Hb_071433_010--Hb_005214_050 Hb_170632_010 Hb_170632_010 Hb_071433_010--Hb_170632_010 Hb_185830_090--Hb_003050_170 Hb_004154_010 Hb_004154_010 Hb_185830_090--Hb_004154_010 Hb_185830_090--Hb_133508_020 Hb_185830_090--Hb_006721_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.540593 0.994315 1.40045 0.167524 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.305476 0

CAGE analysis