Hb_118034_010

Information

Type -
Description -
Location Contig118034: 1772-2029
Sequence    

Annotation

kegg
ID pop:POPTR_0025s00560g
description Pyrophosphate-energized vacuolar membrane proton pump family protein
nr
ID XP_012081156.1
description PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
swissprot
ID P21616
description Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata PE=1 SV=4
trembl
ID A0A067K5F3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17005 PE=3 SV=1
Gene Ontology
ID GO:0016020
description pyrophosphate-energized vacuolar membrane proton pump

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05426: 1588-1792
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118034_010 0.0 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
2 Hb_022973_010 0.2146379993 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
3 Hb_025623_010 0.2188649573 - - -
4 Hb_002370_020 0.2188720543 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
5 Hb_027472_190 0.2232468874 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
6 Hb_000300_650 0.2239900255 - - PREDICTED: arabinogalactan peptide 13-like [Jatropha curcas]
7 Hb_011501_020 0.2254380992 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
8 Hb_000866_400 0.2258626884 - - -
9 Hb_002400_300 0.2291728564 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
10 Hb_003371_280 0.2294496618 - - unnamed protein product [Vitis vinifera]
11 Hb_000975_170 0.2295631875 - - PREDICTED: UDP-glucuronic acid decarboxylase 6 isoform X1 [Jatropha curcas]
12 Hb_001248_140 0.2306875393 - - Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative [Ricinus communis]
13 Hb_002374_510 0.2314864756 - - Esterase precursor, putative [Ricinus communis]
14 Hb_000705_270 0.2316668846 - - PREDICTED: uncharacterized protein LOC105131117 [Populus euphratica]
15 Hb_011519_040 0.2340047942 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
16 Hb_169960_010 0.2348908126 - - -
17 Hb_003688_120 0.2361524095 - - PREDICTED: uncharacterized protein LOC105350793 [Fragaria vesca subsp. vesca]
18 Hb_091236_010 0.2413078299 - - hypothetical protein POPTR_0019s12290g [Populus trichocarpa]
19 Hb_014102_010 0.2413731889 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_005207_040 0.2420050276 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Cicer arietinum]

Gene co-expression network

sample Hb_118034_010 Hb_118034_010 Hb_022973_010 Hb_022973_010 Hb_118034_010--Hb_022973_010 Hb_025623_010 Hb_025623_010 Hb_118034_010--Hb_025623_010 Hb_002370_020 Hb_002370_020 Hb_118034_010--Hb_002370_020 Hb_027472_190 Hb_027472_190 Hb_118034_010--Hb_027472_190 Hb_000300_650 Hb_000300_650 Hb_118034_010--Hb_000300_650 Hb_011501_020 Hb_011501_020 Hb_118034_010--Hb_011501_020 Hb_022973_010--Hb_025623_010 Hb_000866_400 Hb_000866_400 Hb_022973_010--Hb_000866_400 Hb_121624_010 Hb_121624_010 Hb_022973_010--Hb_121624_010 Hb_011519_040 Hb_011519_040 Hb_022973_010--Hb_011519_040 Hb_022973_010--Hb_011501_020 Hb_022973_010--Hb_000300_650 Hb_025623_010--Hb_011501_020 Hb_025623_010--Hb_000866_400 Hb_025623_010--Hb_002370_020 Hb_025623_010--Hb_121624_010 Hb_149507_010 Hb_149507_010 Hb_025623_010--Hb_149507_010 Hb_001269_660 Hb_001269_660 Hb_025623_010--Hb_001269_660 Hb_002370_020--Hb_000866_400 Hb_002370_020--Hb_149507_010 Hb_003371_280 Hb_003371_280 Hb_002370_020--Hb_003371_280 Hb_002370_020--Hb_001269_660 Hb_002374_510 Hb_002374_510 Hb_002370_020--Hb_002374_510 Hb_094437_030 Hb_094437_030 Hb_027472_190--Hb_094437_030 Hb_000392_490 Hb_000392_490 Hb_027472_190--Hb_000392_490 Hb_003714_030 Hb_003714_030 Hb_027472_190--Hb_003714_030 Hb_016564_050 Hb_016564_050 Hb_027472_190--Hb_016564_050 Hb_007295_020 Hb_007295_020 Hb_027472_190--Hb_007295_020 Hb_090390_010 Hb_090390_010 Hb_027472_190--Hb_090390_010 Hb_000300_650--Hb_002370_020 Hb_000300_650--Hb_003371_280 Hb_000014_200 Hb_000014_200 Hb_000300_650--Hb_000014_200 Hb_169960_010 Hb_169960_010 Hb_000300_650--Hb_169960_010 Hb_000034_060 Hb_000034_060 Hb_000300_650--Hb_000034_060 Hb_000343_090 Hb_000343_090 Hb_011501_020--Hb_000343_090 Hb_011501_020--Hb_000866_400 Hb_002245_060 Hb_002245_060 Hb_011501_020--Hb_002245_060 Hb_005622_040 Hb_005622_040 Hb_011501_020--Hb_005622_040 Hb_011501_020--Hb_121624_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.255943 3.21624 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.584626 1.05348 3.1394

CAGE analysis