Hb_118046_010

Information

Type -
Description -
Location Contig118046: 10646-13541
Sequence    

Annotation

kegg
ID sot:102596706
description uncharacterized LOC102596706
nr
ID XP_006360681.1
description PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
swissprot
ID -
description -
trembl
ID M1B3G9
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402013972 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118046_010 0.0 - - PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
2 Hb_003442_120 0.0253635481 - - hypothetical protein VITISV_019818 [Vitis vinifera]
3 Hb_004063_010 0.0612547812 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_003727_060 0.08430272 - - nucleic acid binding protein, putative [Ricinus communis]
5 Hb_130579_050 0.0868375002 - - hypothetical protein JCGZ_25577 [Jatropha curcas]
6 Hb_002025_240 0.0906856549 - - -
7 Hb_000028_270 0.0971521005 - - -
8 Hb_002585_060 0.1260133026 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
9 Hb_058095_030 0.1336564603 - - -
10 Hb_004021_120 0.1464633067 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
11 Hb_000236_430 0.1604239181 - - PREDICTED: uncharacterized protein LOC105633302 [Jatropha curcas]
12 Hb_027337_050 0.1810514593 - - polyprotein [Citrus endogenous pararetrovirus]
13 Hb_012807_070 0.1941600715 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
14 Hb_026053_030 0.1946284777 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
15 Hb_003938_100 0.198184792 - - conserved hypothetical protein [Ricinus communis]
16 Hb_071130_020 0.1987566271 - - -
17 Hb_038190_030 0.1988016283 - - -
18 Hb_009780_010 0.2002186526 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005765_020 0.2055733149 - - -
20 Hb_001856_110 0.206333691 - - PREDICTED: cellulose synthase-like protein G2 [Populus euphratica]

Gene co-expression network

sample Hb_118046_010 Hb_118046_010 Hb_003442_120 Hb_003442_120 Hb_118046_010--Hb_003442_120 Hb_004063_010 Hb_004063_010 Hb_118046_010--Hb_004063_010 Hb_003727_060 Hb_003727_060 Hb_118046_010--Hb_003727_060 Hb_130579_050 Hb_130579_050 Hb_118046_010--Hb_130579_050 Hb_002025_240 Hb_002025_240 Hb_118046_010--Hb_002025_240 Hb_000028_270 Hb_000028_270 Hb_118046_010--Hb_000028_270 Hb_003442_120--Hb_002025_240 Hb_003442_120--Hb_004063_010 Hb_003442_120--Hb_130579_050 Hb_003442_120--Hb_003727_060 Hb_003442_120--Hb_000028_270 Hb_004063_010--Hb_003727_060 Hb_002585_060 Hb_002585_060 Hb_004063_010--Hb_002585_060 Hb_058095_030 Hb_058095_030 Hb_004063_010--Hb_058095_030 Hb_004063_010--Hb_000028_270 Hb_003727_060--Hb_002585_060 Hb_003938_100 Hb_003938_100 Hb_003727_060--Hb_003938_100 Hb_038190_030 Hb_038190_030 Hb_003727_060--Hb_038190_030 Hb_130579_050--Hb_002025_240 Hb_130579_050--Hb_004063_010 Hb_130579_050--Hb_003727_060 Hb_130579_050--Hb_000028_270 Hb_002025_240--Hb_004063_010 Hb_002025_240--Hb_003727_060 Hb_027337_050 Hb_027337_050 Hb_002025_240--Hb_027337_050 Hb_000028_270--Hb_058095_030 Hb_005765_020 Hb_005765_020 Hb_000028_270--Hb_005765_020 Hb_000028_270--Hb_002585_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0756999 0.0130764 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0252111 0.0651796

CAGE analysis