Hb_118720_010

Information

Type -
Description -
Location Contig118720: 2-509
Sequence    

Annotation

kegg
ID rcu:RCOM_0894640
description hypothetical protein
nr
ID XP_012073303.1
description PREDICTED: uncharacterized protein LOC105634948 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06240 PE=4 SV=1
Gene Ontology
ID GO:0006259
description PREDICTED: uncharacterized protein LOC105634948

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118720_010 0.0 - - PREDICTED: uncharacterized protein LOC105634948 [Jatropha curcas]
2 Hb_002783_010 0.1280086553 - - PREDICTED: uncharacterized protein LOC105635318 [Jatropha curcas]
3 Hb_000179_180 0.1494271685 - - hypothetical protein EUGRSUZ_C031461, partial [Eucalyptus grandis]
4 Hb_002742_080 0.1600762592 - - unknown [Populus trichocarpa]
5 Hb_116638_010 0.1641528716 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000059_200 0.1687970983 - - PREDICTED: WEB family protein At2g38370-like [Jatropha curcas]
7 Hb_001493_080 0.1786163469 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
8 Hb_008749_060 0.1799596496 - - PREDICTED: uncharacterized protein LOC105639821 [Jatropha curcas]
9 Hb_015354_010 0.1804616068 - - PREDICTED: B2 protein [Jatropha curcas]
10 Hb_005656_080 0.1817218531 - - PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Jatropha curcas]
11 Hb_000537_140 0.1821198527 - - lupus la ribonucleoprotein, putative [Ricinus communis]
12 Hb_000100_130 0.183133408 - - hypothetical protein VITISV_026702 [Vitis vinifera]
13 Hb_001052_040 0.1834314373 - - Ferredoxin-3, chloroplast precursor, putative [Ricinus communis]
14 Hb_011932_010 0.1843817673 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
15 Hb_000215_190 0.1845052246 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Jatropha curcas]
16 Hb_002837_110 0.184672063 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial [Jatropha curcas]
17 Hb_002666_080 0.1861366171 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_003097_180 0.1864120583 - - PREDICTED: crossover junction endonuclease MUS81 [Jatropha curcas]
19 Hb_000158_130 0.1879724224 - - PREDICTED: uncharacterized protein LOC105647950 isoform X1 [Jatropha curcas]
20 Hb_172141_010 0.1883628137 - - PREDICTED: uncharacterized protein LOC105641033 [Jatropha curcas]

Gene co-expression network

sample Hb_118720_010 Hb_118720_010 Hb_002783_010 Hb_002783_010 Hb_118720_010--Hb_002783_010 Hb_000179_180 Hb_000179_180 Hb_118720_010--Hb_000179_180 Hb_002742_080 Hb_002742_080 Hb_118720_010--Hb_002742_080 Hb_116638_010 Hb_116638_010 Hb_118720_010--Hb_116638_010 Hb_000059_200 Hb_000059_200 Hb_118720_010--Hb_000059_200 Hb_001493_080 Hb_001493_080 Hb_118720_010--Hb_001493_080 Hb_002783_010--Hb_002742_080 Hb_015354_010 Hb_015354_010 Hb_002783_010--Hb_015354_010 Hb_000152_670 Hb_000152_670 Hb_002783_010--Hb_000152_670 Hb_001052_040 Hb_001052_040 Hb_002783_010--Hb_001052_040 Hb_001865_040 Hb_001865_040 Hb_002783_010--Hb_001865_040 Hb_011932_010 Hb_011932_010 Hb_000179_180--Hb_011932_010 Hb_000179_180--Hb_000059_200 Hb_000152_640 Hb_000152_640 Hb_000179_180--Hb_000152_640 Hb_009393_200 Hb_009393_200 Hb_000179_180--Hb_009393_200 Hb_001484_100 Hb_001484_100 Hb_000179_180--Hb_001484_100 Hb_002742_080--Hb_001052_040 Hb_005333_030 Hb_005333_030 Hb_002742_080--Hb_005333_030 Hb_003710_040 Hb_003710_040 Hb_002742_080--Hb_003710_040 Hb_000261_290 Hb_000261_290 Hb_002742_080--Hb_000261_290 Hb_128376_010 Hb_128376_010 Hb_002742_080--Hb_128376_010 Hb_002320_070 Hb_002320_070 Hb_002742_080--Hb_002320_070 Hb_116638_010--Hb_015354_010 Hb_003376_070 Hb_003376_070 Hb_116638_010--Hb_003376_070 Hb_116638_010--Hb_001052_040 Hb_159307_010 Hb_159307_010 Hb_116638_010--Hb_159307_010 Hb_116638_010--Hb_002742_080 Hb_073171_090 Hb_073171_090 Hb_000059_200--Hb_073171_090 Hb_002081_120 Hb_002081_120 Hb_000059_200--Hb_002081_120 Hb_096819_010 Hb_096819_010 Hb_000059_200--Hb_096819_010 Hb_000958_150 Hb_000958_150 Hb_000059_200--Hb_000958_150 Hb_003470_030 Hb_003470_030 Hb_000059_200--Hb_003470_030 Hb_000205_130 Hb_000205_130 Hb_000059_200--Hb_000205_130 Hb_091675_010 Hb_091675_010 Hb_001493_080--Hb_091675_010 Hb_001493_080--Hb_000059_200 Hb_000608_260 Hb_000608_260 Hb_001493_080--Hb_000608_260 Hb_001489_100 Hb_001489_100 Hb_001493_080--Hb_001489_100 Hb_000116_150 Hb_000116_150 Hb_001493_080--Hb_000116_150 Hb_003430_060 Hb_003430_060 Hb_001493_080--Hb_003430_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.3895 44.8674 25.0777 27.5119 16.8819 58.2168
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.43999 2.55403 10.8438 14.0497 3.25791

CAGE analysis