Hb_118941_010

Information

Type -
Description -
Location Contig118941: 50-474
Sequence    

Annotation

kegg
ID rcu:RCOM_0592550
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_012091048.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID Q9SD62
description Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1
trembl
ID A0A067LC70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01308 PE=4 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05610: 111-467
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118941_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_001277_390 0.0188139439 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
3 Hb_000224_070 0.0482461864 - - -
4 Hb_000027_020 0.0626447644 - - Nonspecific lipid-transfer protein, putative [Ricinus communis]
5 Hb_153199_010 0.0637259226 - - -
6 Hb_007432_040 0.0637819691 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
7 Hb_004032_170 0.0638561665 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
8 Hb_000530_080 0.0640721142 - - PREDICTED: serine/threonine-protein kinase D6PKL2-like [Jatropha curcas]
9 Hb_000733_170 0.0646008488 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
10 Hb_001591_020 0.065928938 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
11 Hb_002235_340 0.0660927432 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
12 Hb_001817_050 0.0669821926 transcription factor TF Family: C2H2 PREDICTED: transcriptional regulator SUPERMAN [Jatropha curcas]
13 Hb_120496_010 0.0673174764 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
14 Hb_001892_040 0.0674898878 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
15 Hb_000645_040 0.0698388001 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
16 Hb_000203_130 0.0719486525 - - -
17 Hb_005976_030 0.0728133361 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
18 Hb_000103_210 0.0746105643 - - PREDICTED: protein lin-12-like isoform X1 [Populus euphratica]
19 Hb_000258_010 0.075384777 - - lipid transfer precursor protein [Hevea brasiliensis]
20 Hb_001322_200 0.0772779471 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_118941_010 Hb_118941_010 Hb_001277_390 Hb_001277_390 Hb_118941_010--Hb_001277_390 Hb_000224_070 Hb_000224_070 Hb_118941_010--Hb_000224_070 Hb_000027_020 Hb_000027_020 Hb_118941_010--Hb_000027_020 Hb_153199_010 Hb_153199_010 Hb_118941_010--Hb_153199_010 Hb_007432_040 Hb_007432_040 Hb_118941_010--Hb_007432_040 Hb_004032_170 Hb_004032_170 Hb_118941_010--Hb_004032_170 Hb_001277_390--Hb_000224_070 Hb_120496_010 Hb_120496_010 Hb_001277_390--Hb_120496_010 Hb_001591_020 Hb_001591_020 Hb_001277_390--Hb_001591_020 Hb_000733_170 Hb_000733_170 Hb_001277_390--Hb_000733_170 Hb_001892_040 Hb_001892_040 Hb_001277_390--Hb_001892_040 Hb_000645_040 Hb_000645_040 Hb_000224_070--Hb_000645_040 Hb_000325_090 Hb_000325_090 Hb_000224_070--Hb_000325_090 Hb_000224_070--Hb_120496_010 Hb_000224_070--Hb_001892_040 Hb_005699_100 Hb_005699_100 Hb_000027_020--Hb_005699_100 Hb_000027_020--Hb_000645_040 Hb_002105_070 Hb_002105_070 Hb_000027_020--Hb_002105_070 Hb_001634_070 Hb_001634_070 Hb_000027_020--Hb_001634_070 Hb_001322_200 Hb_001322_200 Hb_000027_020--Hb_001322_200 Hb_153199_010--Hb_007432_040 Hb_153199_010--Hb_004032_170 Hb_002235_340 Hb_002235_340 Hb_153199_010--Hb_002235_340 Hb_000530_080 Hb_000530_080 Hb_153199_010--Hb_000530_080 Hb_001817_050 Hb_001817_050 Hb_153199_010--Hb_001817_050 Hb_153199_010--Hb_000733_170 Hb_007432_040--Hb_004032_170 Hb_007432_040--Hb_000530_080 Hb_007432_040--Hb_000733_170 Hb_007432_040--Hb_001591_020 Hb_007432_040--Hb_001892_040 Hb_004032_170--Hb_000530_080 Hb_004032_170--Hb_000733_170 Hb_004032_170--Hb_001591_020 Hb_004032_170--Hb_001892_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0899012 0.204325 10.8825 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis