Hb_119066_010

Information

Type -
Description -
Location Contig119066: 633-1232
Sequence    

Annotation

kegg
ID pop:POPTR_0014s16490g
description POPTRDRAFT_573100; hypothetical protein
nr
ID XP_012081528.1
description PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1B8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18496 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_119066_010 0.0 - - PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
2 Hb_070136_010 0.0955229102 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
3 Hb_002871_110 0.104098072 transcription factor TF Family: ARF hypothetical protein POPTR_0014s12980g [Populus trichocarpa]
4 Hb_006970_170 0.1114531127 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
5 Hb_002078_320 0.1118255865 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
6 Hb_002635_020 0.112200713 - - hypothetical protein POPTR_0018s09790g [Populus trichocarpa]
7 Hb_146901_010 0.1128832548 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
8 Hb_000185_170 0.1174314664 - - ATP binding protein, putative [Ricinus communis]
9 Hb_007894_120 0.1191956009 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
10 Hb_044653_050 0.1208031924 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
11 Hb_005365_010 0.1212837363 - - PREDICTED: serine carboxypeptidase-like 20 [Jatropha curcas]
12 Hb_000694_050 0.1213468652 - - Nuclease PA3, putative [Ricinus communis]
13 Hb_030982_050 0.1223973456 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
14 Hb_003454_050 0.1234080417 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
15 Hb_004162_320 0.1244669601 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
16 Hb_000922_160 0.1250473649 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose 5-phosphate reductoisomerase putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]
17 Hb_106089_010 0.1254934871 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
18 Hb_000932_060 0.1257457411 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010174_180 0.1259960496 - - protein binding protein, putative [Ricinus communis]
20 Hb_000941_090 0.1281245505 - - PREDICTED: protein trichome birefringence [Jatropha curcas]

Gene co-expression network

sample Hb_119066_010 Hb_119066_010 Hb_070136_010 Hb_070136_010 Hb_119066_010--Hb_070136_010 Hb_002871_110 Hb_002871_110 Hb_119066_010--Hb_002871_110 Hb_006970_170 Hb_006970_170 Hb_119066_010--Hb_006970_170 Hb_002078_320 Hb_002078_320 Hb_119066_010--Hb_002078_320 Hb_002635_020 Hb_002635_020 Hb_119066_010--Hb_002635_020 Hb_146901_010 Hb_146901_010 Hb_119066_010--Hb_146901_010 Hb_000185_170 Hb_000185_170 Hb_070136_010--Hb_000185_170 Hb_000922_160 Hb_000922_160 Hb_070136_010--Hb_000922_160 Hb_070136_010--Hb_002078_320 Hb_000037_200 Hb_000037_200 Hb_070136_010--Hb_000037_200 Hb_001629_120 Hb_001629_120 Hb_070136_010--Hb_001629_120 Hb_002871_110--Hb_006970_170 Hb_000010_370 Hb_000010_370 Hb_002871_110--Hb_000010_370 Hb_000500_230 Hb_000500_230 Hb_002871_110--Hb_000500_230 Hb_000025_590 Hb_000025_590 Hb_002871_110--Hb_000025_590 Hb_000694_050 Hb_000694_050 Hb_002871_110--Hb_000694_050 Hb_007894_120 Hb_007894_120 Hb_002871_110--Hb_007894_120 Hb_006970_170--Hb_000500_230 Hb_006970_170--Hb_007894_120 Hb_006970_170--Hb_000010_370 Hb_030982_050 Hb_030982_050 Hb_006970_170--Hb_030982_050 Hb_003849_030 Hb_003849_030 Hb_006970_170--Hb_003849_030 Hb_003506_010 Hb_003506_010 Hb_002078_320--Hb_003506_010 Hb_004162_320 Hb_004162_320 Hb_002078_320--Hb_004162_320 Hb_000901_010 Hb_000901_010 Hb_002078_320--Hb_000901_010 Hb_000987_020 Hb_000987_020 Hb_002078_320--Hb_000987_020 Hb_002078_320--Hb_000185_170 Hb_020805_070 Hb_020805_070 Hb_002078_320--Hb_020805_070 Hb_002601_140 Hb_002601_140 Hb_002635_020--Hb_002601_140 Hb_002635_020--Hb_000922_160 Hb_002635_020--Hb_002078_320 Hb_000162_200 Hb_000162_200 Hb_002635_020--Hb_000162_200 Hb_002635_020--Hb_004162_320 Hb_002635_020--Hb_003506_010 Hb_146901_010--Hb_000162_200 Hb_010557_020 Hb_010557_020 Hb_146901_010--Hb_010557_020 Hb_146901_010--Hb_002635_020 Hb_146901_010--Hb_004162_320 Hb_001883_010 Hb_001883_010 Hb_146901_010--Hb_001883_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.47259 2.96912 2.40706 0 0.116259
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.100976 0 0 1.13905 2.6108

CAGE analysis