Hb_119316_020

Information

Type -
Description -
Location Contig119316: 1345-2421
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_119316_020 0.0 - - -
2 Hb_001511_250 0.0484212299 - - fatty acid desaturase [Manihot esculenta]
3 Hb_001636_060 0.1104537494 - - Putative serine/threonine-protein kinase-like protein CCR3 [Glycine soja]
4 Hb_000086_620 0.1531376697 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
5 Hb_001579_070 0.1535924173 - - PREDICTED: uncharacterized protein LOC105644596 [Jatropha curcas]
6 Hb_031108_010 0.1615624327 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
7 Hb_001242_180 0.1638085595 - - choline/ethanolamine kinase, putative [Ricinus communis]
8 Hb_005080_020 0.1663610719 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
9 Hb_001623_410 0.1673818737 - - PREDICTED: beta-amylase 1, chloroplastic [Jatropha curcas]
10 Hb_000020_070 0.1708261533 - - PREDICTED: probable serine/threonine-protein kinase NAK [Jatropha curcas]
11 Hb_007218_060 0.1713739795 - - PREDICTED: polyadenylate-binding protein 6 isoform X1 [Jatropha curcas]
12 Hb_001369_020 0.1728160156 - - PREDICTED: U-box domain-containing protein 35-like [Jatropha curcas]
13 Hb_011930_120 0.1799516788 - - PREDICTED: uncharacterized protein LOC105649794 isoform X1 [Jatropha curcas]
14 Hb_073171_050 0.1802814347 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
15 Hb_001898_130 0.1814880455 - - ATP binding protein, putative [Ricinus communis]
16 Hb_028285_020 0.1914365551 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
17 Hb_009189_050 0.1945792639 - - PREDICTED: uncharacterized protein LOC105648080 [Jatropha curcas]
18 Hb_000003_240 0.1952076521 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000454_080 0.1964947504 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
20 Hb_001294_050 0.1968557289 desease resistance Gene Name: NB-ARC Disease resistance protein RPP13, putative [Ricinus communis]

Gene co-expression network

sample Hb_119316_020 Hb_119316_020 Hb_001511_250 Hb_001511_250 Hb_119316_020--Hb_001511_250 Hb_001636_060 Hb_001636_060 Hb_119316_020--Hb_001636_060 Hb_000086_620 Hb_000086_620 Hb_119316_020--Hb_000086_620 Hb_001579_070 Hb_001579_070 Hb_119316_020--Hb_001579_070 Hb_031108_010 Hb_031108_010 Hb_119316_020--Hb_031108_010 Hb_001242_180 Hb_001242_180 Hb_119316_020--Hb_001242_180 Hb_001511_250--Hb_001636_060 Hb_005080_020 Hb_005080_020 Hb_001511_250--Hb_005080_020 Hb_001511_250--Hb_031108_010 Hb_000020_070 Hb_000020_070 Hb_001511_250--Hb_000020_070 Hb_001511_250--Hb_000086_620 Hb_001636_060--Hb_031108_010 Hb_001636_060--Hb_000020_070 Hb_001636_060--Hb_005080_020 Hb_001898_130 Hb_001898_130 Hb_001636_060--Hb_001898_130 Hb_001623_410 Hb_001623_410 Hb_000086_620--Hb_001623_410 Hb_011930_120 Hb_011930_120 Hb_000086_620--Hb_011930_120 Hb_001989_060 Hb_001989_060 Hb_000086_620--Hb_001989_060 Hb_001247_010 Hb_001247_010 Hb_000086_620--Hb_001247_010 Hb_010126_030 Hb_010126_030 Hb_000086_620--Hb_010126_030 Hb_000451_040 Hb_000451_040 Hb_000086_620--Hb_000451_040 Hb_001579_070--Hb_011930_120 Hb_000003_240 Hb_000003_240 Hb_001579_070--Hb_000003_240 Hb_155946_030 Hb_155946_030 Hb_001579_070--Hb_155946_030 Hb_001519_060 Hb_001519_060 Hb_001579_070--Hb_001519_060 Hb_000680_180 Hb_000680_180 Hb_001579_070--Hb_000680_180 Hb_001579_070--Hb_031108_010 Hb_009476_110 Hb_009476_110 Hb_031108_010--Hb_009476_110 Hb_000776_050 Hb_000776_050 Hb_031108_010--Hb_000776_050 Hb_124677_020 Hb_124677_020 Hb_031108_010--Hb_124677_020 Hb_031108_010--Hb_155946_030 Hb_031108_010--Hb_000086_620 Hb_001242_180--Hb_000003_240 Hb_001242_180--Hb_001579_070 Hb_005348_090 Hb_005348_090 Hb_001242_180--Hb_005348_090 Hb_001878_020 Hb_001878_020 Hb_001242_180--Hb_001878_020 Hb_000454_080 Hb_000454_080 Hb_001242_180--Hb_000454_080 Hb_002217_190 Hb_002217_190 Hb_001242_180--Hb_002217_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.92522 277.968 245.135 95.9818 0.168933 0.406001
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.3672 52.2602 34.2389 24.1363 85.6688

CAGE analysis