Hb_119789_010

Information

Type -
Description -
Location Contig119789: 221-709
Sequence    

Annotation

kegg
ID pper:PRUPE_ppb016160mg
description hypothetical protein
nr
ID XP_011037146.1
description PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
swissprot
ID -
description -
trembl
ID M5X5B2
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb016160mg PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_119789_010 0.0 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
2 Hb_156055_020 0.0088993257 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004899_160 0.0166470316 - - -
4 Hb_000896_140 0.0216649708 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
5 Hb_007040_030 0.022277981 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
6 Hb_000926_170 0.0288433062 - - conserved hypothetical protein [Ricinus communis]
7 Hb_021409_060 0.0375772898 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
8 Hb_168436_010 0.0422946741 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
9 Hb_002127_010 0.0508274486 - - Aluminum activated malate transporter family protein, putative [Theobroma cacao]
10 Hb_001268_360 0.059959223 - - PREDICTED: uncharacterized protein LOC104447679 [Eucalyptus grandis]
11 Hb_010896_010 0.0670238328 - - -
12 Hb_000002_130 0.0716941409 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
13 Hb_067197_020 0.0781082528 - - -
14 Hb_081445_010 0.0981218959 - - hypothetical protein JCGZ_04541 [Jatropha curcas]
15 Hb_101733_020 0.0987236645 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Jatropha curcas]
16 Hb_110562_020 0.1008531704 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
17 Hb_000672_070 0.1078684676 - - PREDICTED: uncharacterized protein LOC105631678 [Jatropha curcas]
18 Hb_110048_010 0.1092856661 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
19 Hb_005843_070 0.1104821163 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
20 Hb_000172_730 0.116394277 - - PREDICTED: cytochrome P450 CYP736A12-like [Nicotiana sylvestris]

Gene co-expression network

sample Hb_119789_010 Hb_119789_010 Hb_156055_020 Hb_156055_020 Hb_119789_010--Hb_156055_020 Hb_004899_160 Hb_004899_160 Hb_119789_010--Hb_004899_160 Hb_000896_140 Hb_000896_140 Hb_119789_010--Hb_000896_140 Hb_007040_030 Hb_007040_030 Hb_119789_010--Hb_007040_030 Hb_000926_170 Hb_000926_170 Hb_119789_010--Hb_000926_170 Hb_021409_060 Hb_021409_060 Hb_119789_010--Hb_021409_060 Hb_156055_020--Hb_004899_160 Hb_156055_020--Hb_021409_060 Hb_156055_020--Hb_000896_140 Hb_156055_020--Hb_007040_030 Hb_168436_010 Hb_168436_010 Hb_156055_020--Hb_168436_010 Hb_004899_160--Hb_021409_060 Hb_004899_160--Hb_168436_010 Hb_002127_010 Hb_002127_010 Hb_004899_160--Hb_002127_010 Hb_004899_160--Hb_000896_140 Hb_000896_140--Hb_007040_030 Hb_000896_140--Hb_000926_170 Hb_000002_130 Hb_000002_130 Hb_000896_140--Hb_000002_130 Hb_007040_030--Hb_000926_170 Hb_007040_030--Hb_004899_160 Hb_007040_030--Hb_000002_130 Hb_000926_170--Hb_156055_020 Hb_000926_170--Hb_000002_130 Hb_000926_170--Hb_004899_160 Hb_021409_060--Hb_168436_010 Hb_021409_060--Hb_002127_010 Hb_001268_360 Hb_001268_360 Hb_021409_060--Hb_001268_360 Hb_010896_010 Hb_010896_010 Hb_021409_060--Hb_010896_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.676578 0.0947227 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis