Hb_120040_010

Information

Type -
Description -
Location Contig120040: 357-620
Sequence    

Annotation

kegg
ID egr:104414888
description disease resistance protein RGA2-like
nr
ID XP_012086129.1
description PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120040_010 0.0 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
2 Hb_001417_090 0.0878071265 - - PREDICTED: uncharacterized protein LOC105650625 [Jatropha curcas]
3 Hb_008021_050 0.0885203126 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_001856_130 0.0973526359 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
5 Hb_000149_020 0.101685367 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
6 Hb_009225_070 0.1024090865 - - tonoplast intrinsic protein, putative [Ricinus communis]
7 Hb_002522_040 0.1052461532 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
8 Hb_007919_010 0.1052933325 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004970_100 0.1124344529 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
10 Hb_000614_120 0.1154337353 - - hypothetical protein JCGZ_17923 [Jatropha curcas]
11 Hb_000646_040 0.1169799235 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74-like [Jatropha curcas]
12 Hb_000468_050 0.1180887419 - - -
13 Hb_002768_040 0.1197903398 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006026_020 0.1198716703 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
15 Hb_003607_080 0.1201527903 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
16 Hb_005214_050 0.1227403791 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
17 Hb_000120_560 0.1233663277 - - protein with unknown function [Ricinus communis]
18 Hb_004031_050 0.1243016262 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
19 Hb_000098_230 0.1258753526 - - Potassium channel AKT2/3, putative [Ricinus communis]
20 Hb_170077_020 0.1278762444 - - PREDICTED: probable serine incorporator [Jatropha curcas]

Gene co-expression network

sample Hb_120040_010 Hb_120040_010 Hb_001417_090 Hb_001417_090 Hb_120040_010--Hb_001417_090 Hb_008021_050 Hb_008021_050 Hb_120040_010--Hb_008021_050 Hb_001856_130 Hb_001856_130 Hb_120040_010--Hb_001856_130 Hb_000149_020 Hb_000149_020 Hb_120040_010--Hb_000149_020 Hb_009225_070 Hb_009225_070 Hb_120040_010--Hb_009225_070 Hb_002522_040 Hb_002522_040 Hb_120040_010--Hb_002522_040 Hb_001417_090--Hb_001856_130 Hb_000739_190 Hb_000739_190 Hb_001417_090--Hb_000739_190 Hb_004970_100 Hb_004970_100 Hb_001417_090--Hb_004970_100 Hb_000614_120 Hb_000614_120 Hb_001417_090--Hb_000614_120 Hb_000120_560 Hb_000120_560 Hb_001417_090--Hb_000120_560 Hb_003607_080 Hb_003607_080 Hb_008021_050--Hb_003607_080 Hb_003466_010 Hb_003466_010 Hb_008021_050--Hb_003466_010 Hb_000093_010 Hb_000093_010 Hb_008021_050--Hb_000093_010 Hb_001688_030 Hb_001688_030 Hb_008021_050--Hb_001688_030 Hb_007919_010 Hb_007919_010 Hb_008021_050--Hb_007919_010 Hb_000120_600 Hb_000120_600 Hb_001856_130--Hb_000120_600 Hb_153180_010 Hb_153180_010 Hb_001856_130--Hb_153180_010 Hb_001953_010 Hb_001953_010 Hb_001856_130--Hb_001953_010 Hb_000000_320 Hb_000000_320 Hb_001856_130--Hb_000000_320 Hb_000740_080 Hb_000740_080 Hb_000149_020--Hb_000740_080 Hb_006026_020 Hb_006026_020 Hb_000149_020--Hb_006026_020 Hb_011355_020 Hb_011355_020 Hb_000149_020--Hb_011355_020 Hb_000897_010 Hb_000897_010 Hb_000149_020--Hb_000897_010 Hb_002897_030 Hb_002897_030 Hb_000149_020--Hb_002897_030 Hb_000468_050 Hb_000468_050 Hb_009225_070--Hb_000468_050 Hb_002592_070 Hb_002592_070 Hb_009225_070--Hb_002592_070 Hb_000816_150 Hb_000816_150 Hb_009225_070--Hb_000816_150 Hb_011314_010 Hb_011314_010 Hb_009225_070--Hb_011314_010 Hb_012553_030 Hb_012553_030 Hb_009225_070--Hb_012553_030 Hb_022693_090 Hb_022693_090 Hb_009225_070--Hb_022693_090 Hb_092975_010 Hb_092975_010 Hb_002522_040--Hb_092975_010 Hb_122951_010 Hb_122951_010 Hb_002522_040--Hb_122951_010 Hb_004031_050 Hb_004031_050 Hb_002522_040--Hb_004031_050 Hb_001117_180 Hb_001117_180 Hb_002522_040--Hb_001117_180 Hb_002522_040--Hb_153180_010 Hb_178049_010 Hb_178049_010 Hb_002522_040--Hb_178049_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.14929 0.924715 5.04429 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.392405 0.595613

CAGE analysis